Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca10g00740 ATGGAGTCATTTCACAATCCTATCAAAACCCAACCTCTGATAAAATTCATATTAGTCTCCTCTTCATTCTGTGCCATTTCTCTGTGTGTATCTGTGTTACTCTTAGCCACACCAAAGATTGTAGTAGACGTGGCTTCTCCACCACCACAATATGTGTCTGATCCTACCACTGTTGACCATCTTGTCTTTGGAATTGCCTCAAGTATGATTTCATGGCCTAAGAGGAAGGAATACAACAAGATCTGGTGGAATTGGAAACCCAACAAAACAATGAGAGGGTGTGTTTTCGTAGATACCCTCCCACATGAAGAAAATGCCAAAAATGATGCTTCTCTTCCTCCACTCTGTGTTTCTGAAGACACTTCCCAGTTTCTCTTCACTTACAAGCCTGGTGGTCTAAGATCAGCAATCCGTGTGGCACGTGTGGTGAAAGAGACTGTGGAATTGAACCATTCTGGTGTTAGATGGTATGTGTTTGGTGATGATGACACTGTTTTCTTCCCTCAGAATCTGGTCAAAACTCTTTCCAAATATGATCACAGGCTTTGGTACTATGTTGGGTCCTACTCAGAGATTTATGAGGCTTCCCAGGCTTTTGGCTTTGGAATGGCTTTTGGTGGTGGTGGTTTTGCCATCAGTTCCTCTCTAGCACAAGTCCTAGCCAAGGTTTTTGATTCATGTATACAAAGGTATCCTCATTTGTATGGAAGTGATGCCAGGGTCTACTCTTGCATAACAGAACTAGGTGTGGGATTAACACATGAACCAGGTTTTCATCAGGTTGATTTGAGGGGAAATATCTTTGGCCTATTGGCTGCACATCCATTAACTCCCTTGTTGTCCCTACATCACCCAGATCACACTGATCCTATCTTTCCTAACATGACAACAACAAAATCTTTGCAACATTTATTTGAAGCTGTTAAGGTTGATTCTGAGAGGATCCTACATCAAACAGTTTGTTATGAAAGGAGGCTTTCATGGACAATTTCAGTGTCATGGGGCTATGCTGTTCAAGTATTCCAGCACAACATGCTTCTGCCAGATGTGCTGAGAGTGCAAAAAACATTCAAGCAATGGAAGGAAGGGAATGTTTTGGCTGGAATATTTACTATCAATACAAGAGACCTTCACCCTGACCCATGTAAAAGATCCACCATTTTCTATCTAGATGAAGTGTCTTCTGGCAAAGATGGCATCATAAGCAGTTATAGGAAACATTTCCAAAATTGCTCACACATGGCACCCATGAACAAATTGGAAGTGATCAAAGTGGTTACAAATAAGTTAAACATTGACAACAAACAGATTCCAAGAAGGCACTGTTGTGATGTTTTGCCCTCTAAAGCTGGTGACTTAATGGAAATTGCAATCAGAGAATGCAAATATGAAGAACTGATTTACATGCACTGA 1413 0.4112 MESFHNPIKTQPLIKFILVSSSFCAISLCVSVLLLATPKIVVDVASPPPQYVSDPTTVDHLVFGIASSMISWPKRKEYNKIWWNWKPNKTMRGCVFVDTLPHEENAKNDASLPPLCVSEDTSQFLFTYKPGGLRSAIRVARVVKETVELNHSGVRWYVFGDDDTVFFPQNLVKTLSKYDHRLWYYVGSYSEIYEASQAFGFGMAFGGGGFAISSSLAQVLAKVFDSCIQRYPHLYGSDARVYSCITELGVGLTHEPGFHQVDLRGNIFGLLAAHPLTPLLSLHHPDHTDPIFPNMTTTKSLQHLFEAVKVDSERILHQTVCYERRLSWTISVSWGYAVQVFQHNMLLPDVLRVQKTFKQWKEGNVLAGIFTINTRDLHPDPCKRSTIFYLDEVSSGKDGIISSYRKHFQNCSHMAPMNKLEVIKVVTNKLNIDNKQIPRRHCCDVLPSKAGDLMEIAIRECKYEELIYMH 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca10g00740 470 PANTHER TRANSFERRING GLYCOSYL GROUP TRANSFERASE 7 468 - -
Cca10g00740 470 PANTHER FRINGE-RELATED 7 468 - -
Cca10g00740 470 Gene3D - 48 303 - -
Cca10g00740 470 Pfam Protein of unknown function, DUF604 198 443 IPR006740 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca10g00740 Cca-Chr10 8383973 8385992 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca10g00740 55 437 Glycosyltransferase AT1G05280 54.476 1.76e-154 445
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca10g00740 - - gmx:100779943 818.535
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca10g00740 10 8383973 8385992 Cca10g00740 10 8383973 8385992 ECH
Cca10g00740 10 8383973 8385992 Cca04g01043 04 11391975 11394738 PCT
Cca04g01042 04 11387241 11391243 Cca10g00740 10 8383973 8385992 PCT