Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g00007 ATGAGTGGAGCTGTTCTTGTTGCTGTTGCAGCTGCCATCGGCAACTTACTGCAAGGATGGGATAATGCGACTATAGCAGGATCCATCTTGTACATAAAAAAGGAGTTTCAATTAGAAAGTGAACCCACAGTTGAAGGTCTAATTGTGGCTATGTCACTTATTGGAGCCACCGTAGTTACTACATGCTCTGGAGCCCTATCAGACTTGCTAGGCCGACGTCCAATGTTGATCATCTCCTCTCTTCTTTATTTTGTTAGTTCTCTTGTCATGCTATGGTCTCCAAATGTTTATATCCTCCTCATTGCAAGACTTTTAGATGGTTTGGGAATTGGTTTGGCAGTTACCTTGGTACCTCTTTACATATCTGAGACAGCTCCTCCTGAAATTAGGGGATTACTTAATACACTTCCACAGTTCACTGGTTCTGCCGGAATGTTTTTCTCCTACTGTATGGTTTTTGGGATGTCACTCATGAAGGCTCCAAGCTGGAGAATCATGTTGGGTGTTCTTTCAATTCCTTCTCTTATTTATTTTGCACTCACACTCTTGTTCTTGCCCGAGTCTCCGAGATGGCTTGTCAGTAAAGGCCGAATGCTTGAGGCCAAGAAGGTTTTGCAGAGCCTTCGTGGAAGGGAAGATGTTTCTGGTGAAATGGCTTTATTGGTTGAGGGTCTTGGAGTTGGGGTTGATACAGCCATAGAAGAGTATATAGTTGGTCCAGCCAATGAACTTGCTGGTGAAGAGGATCCATCCAGAGAAAAAGATCATATTAAGTTGTATGGACCAGATCAAGGTCAGTCCTGGGTTGCTAGACCCGTTGCTGGACAAAGTTCTGTTGGCCTTGTATCTCGAAAAGGAAGCATGGCTAATCCGAGTGGTCTAGTGGATCCTCTAGTAACCCTCTTTGGTAGTATTCATGAGAAGCTTCCAGAAACAGGAAGCATGCGAAGTGCCCTTTTCCCTCACTTTGGAAGTATGTTTAGTGTTGGGGGAAATCAACCCAGGAATGAAGATTGGGATGAAGAAAGCCTTGCCAGAGAGGGTGATGATTATGCCTCTGATGCTGCTGCCGGTGATTCTGATGATAATTTGCAGAGTCCATTGATCTCTCGTCAAACAACAAGTCTGGATAAGGACATACCTCGTGGCCATAGTAATCTTTCAAGCATGAGGCAAGGTAGTCTTTTACATGGAAATGCAGGAGAACCCACTGGTAGTACCGGGATTGGTGGTGGTTGGCAGCTAGCATGGAAATGGTCTGAAAGAGAGGGCCCAGATGGAAAGGAAGGTGGCTTTAAGAGAATATATTTACGCCAAGATGGTGGTCCTGGTTCTACACGTGGGTCTGTGGTTTCACTACCTGGTGGTGATTTACCAACTGATGGTGAGATTGTACAGGCTGCTGCTCTGGTGAGTCAGCCAGCCCTTTATAACAAGGAGCTTATGCAACAAGGGCCAGTTGGACCAGCTATGATTCATCCGTCTGAAACTGCTGCAAAAGGGCCAAGTTGGAGTGATCTTTTTGAACCTGGGGTGAAGCATGCTTTGATGGTGGGGGTGGGACTTCAAATTCTTCAGCAGTTCTCTGGTATAAATGGGGTCCTCTACTATACACCTCAAATTCTTGAGCAGGCAGGTGTTGGTTATCTTCTTTCTAACCTAGGCCTTGGTTCTACTTCTTCGTCCTTTCTTATTAGTGCAGTGACAACCTTGTTGATGCTTCCTTGTATAGCTGTTGCCATGAGGCTCATGGATATTTCTGGCAGAAGGACTTTGCTGCTCAGTACAATCCCCATCCTGATAGCAGCTCTTCTCATATTAGTCCTGGGCAGTCTTGTGGATTTGGGCACCACTGCTAATGCATCAATCTCAACCATTAGTGTTATTGTCTATTTCTGTTTCTTTGTCATGGGATTTGGGCCAATTCCTAATATACTTTGTGCAGAGATCTTCCCGACTCGAGTTCGTGGTCTCTGCATTGCCATTTGTGCTCTTACATTTTGGATCTGTGATATTATTGTCACCTACACACTCCCAGTTATGCTCAATTCTGTAGGCCTTGCTGGTGTTTTTGGTATTTATGCTGTCGTGTGCTTCATAGCTTGGGTATTTGTCTTTTTGAAAGTTCCAGAAACCAAGGGCATGCCACTGGAAGTGATCATTGAGTTCTTCTCTGTCGGAGCAAAACAGGTTGACGATACCAAGCACAACTGA 2214 0.4494 MSGAVLVAVAAAIGNLLQGWDNATIAGSILYIKKEFQLESEPTVEGLIVAMSLIGATVVTTCSGALSDLLGRRPMLIISSLLYFVSSLVMLWSPNVYILLIARLLDGLGIGLAVTLVPLYISETAPPEIRGLLNTLPQFTGSAGMFFSYCMVFGMSLMKAPSWRIMLGVLSIPSLIYFALTLLFLPESPRWLVSKGRMLEAKKVLQSLRGREDVSGEMALLVEGLGVGVDTAIEEYIVGPANELAGEEDPSREKDHIKLYGPDQGQSWVARPVAGQSSVGLVSRKGSMANPSGLVDPLVTLFGSIHEKLPETGSMRSALFPHFGSMFSVGGNQPRNEDWDEESLAREGDDYASDAAAGDSDDNLQSPLISRQTTSLDKDIPRGHSNLSSMRQGSLLHGNAGEPTGSTGIGGGWQLAWKWSEREGPDGKEGGFKRIYLRQDGGPGSTRGSVVSLPGGDLPTDGEIVQAAALVSQPALYNKELMQQGPVGPAMIHPSETAAKGPSWSDLFEPGVKHALMVGVGLQILQQFSGINGVLYYTPQILEQAGVGYLLSNLGLGSTSSSFLISAVTTLLMLPCIAVAMRLMDISGRRTLLLSTIPILIAALLILVLGSLVDLGTTANASISTISVIVYFCFFVMGFGPIPNILCAEIFPTRVRGLCIAICALTFWICDIIVTYTLPVMLNSVGLAGVFGIYAVVCFIAWVFVFLKVPETKGMPLEVIIEFFSVGAKQVDDTKHN 737
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g00007 737 Gene3D MFS general substrate transporter like domains 497 735 IPR036259 -
Cca07g00007 737 ProSitePatterns Sugar transport proteins signature 2. 105 130 IPR005829 GO:0016021|GO:0022857|GO:0055085
Cca07g00007 737 MobiDBLite consensus disorder prediction 352 397 - -
Cca07g00007 737 Pfam Sugar (and other) transporter 500 721 IPR005828 GO:0016021|GO:0022857|GO:0055085
Cca07g00007 737 Pfam Sugar (and other) transporter 7 223 IPR005828 GO:0016021|GO:0022857|GO:0055085
Cca07g00007 737 SUPERFAMILY MFS general substrate transporter 6 718 IPR036259 -
Cca07g00007 737 CDD MFS_GLUT_like 514 711 - -
Cca07g00007 737 PANTHER - 1 732 - -
Cca07g00007 737 MobiDBLite consensus disorder prediction 359 397 - -
Cca07g00007 737 CDD MFS_GLUT_like 13 193 - -
Cca07g00007 737 ProSitePatterns Sugar transport proteins signature 1. 63 80 IPR005829 GO:0016021|GO:0022857|GO:0055085
Cca07g00007 737 PANTHER MONOSACCHARIDE-SENSING PROTEIN 1 1 732 - -
Cca07g00007 737 PRINTS Sugar transporter signature 15 25 IPR003663 GO:0016020|GO:0022857|GO:0055085
Cca07g00007 737 PRINTS Sugar transporter signature 100 119 IPR003663 GO:0016020|GO:0022857|GO:0055085
Cca07g00007 737 PRINTS Sugar transporter signature 526 536 IPR003663 GO:0016020|GO:0022857|GO:0055085
Cca07g00007 737 PRINTS Sugar transporter signature 625 646 IPR003663 GO:0016020|GO:0022857|GO:0055085
Cca07g00007 737 PRINTS Sugar transporter signature 648 660 IPR003663 GO:0016020|GO:0022857|GO:0055085
Cca07g00007 737 ProSiteProfiles Major facilitator superfamily (MFS) profile. 7 713 IPR020846 GO:0022857
Cca07g00007 737 Gene3D MFS general substrate transporter like domains 2 252 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g00007 Cca-Chr7 155483 161716 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca07g00007 1 737 Organic Solute Cotransporters AT4G35300 72.568 0.0 1034
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g00007 - - gmx:100790278 1278.85
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca07g00007 07 155483 161716 Cca07g00007 07 155483 161716 ECH
Cca07g00007 07 155483 161716 Cca06g01160 06 25991499 25995476 ECH
Cca07g00007 07 155483 161716 Cca11g00962 11 20498873 20504562 ECH