Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca06g01284 ATGGGTTCTGTTGGAGGGGAAGATGCAATTCAAGAGCCTCATGGTCACGAAGAGAGGATTCTTGTTTCTGTGCGGCTTCGCCCACTCAACAAAATGGAGCTTGCGAGAAATGATGTTTCGGACTGGGAATGCATCAATGACACTACCATCATATACAGGAGCAACCTTTCAGCTCCTGACAGGTCACTCTACCCAACAGCATATTCATTTGACAGTGTATTTCGGTCAGATTGTTCTACAAGGCAGGTGTATGAAAAAGCAGCTAAGGAAGTTGCTCTTTCAGTTGTCGGTGGCATCAATTCAAGCATTTTCGCGTATGGACAAACAAGTAGTGGGAAGACATACACCATGAGTGGCATAACTGAATACACAGTAGCAGACATTTTTAACTACATAGAAAAGCACACGGAGAGAGAATTCATGTTGAAGTTTTCGGCAATTGAGATTTATAATGAATCTGTTAGGGACCTCCTTAGTCCAGACTGTACTCCTCTCCGACTTCTTGATGATCCAGAGAGAGGGACAGTTGTTGAGAAACTGACTGAGGAAACCTTAAGAGACTGGAACCATTTTACAGAACTTCTTTCTTTCTGTGAAGCTCAAAGGCAGATAGGGGAGACATCACTGAATGAAGCAAGCTCCAGATCTCATCAAATTCTAAGACTGACGATTGAAAGTTCTGCACGTGAATTCCTTGGAAATGACAAGTCTAGCTCTCTTTCTTCTTCCGTGAATTTTGTTGATCTTGCTGGAAGTGAGCGAGCATCCCAAACCAACTCAGCTGGCACAAGATTGAAAGAGGGTTGCCACATAAATCGTAGCTTACTAACTCTAGGAACTGTTATCCGCAAACTCAGCAAGGGGAGAAATGGACATATTCCTTTCAGAGATTCAAAGCTAACCCGCATATTGCAGTCCTCATTAGGAGGCAATGCTAGAACTGCTATCATCTGCACCATGAGCCCTGCACGGAGCCATGTTGAACAAACCAGAAACACTCTCTTATTTGCAAGCTGTGCAAAAGAAGTGACAACTAATGCACAAGTCAATGTAGTGGTGTCTGATAAAGCACTAGTCAAGCAATTACAAAAAGAGTTGGCTAGACTGGAAGATGAATTGAGAAACTCGGGGCCAGCCCACCTTACATCTGATACTGCAGCATTGTTGAGAGACAAAGACCGTCAAATTGAGATGTTAAAGAAAGAGGTAAAAGATCTGACCTTGCAGCGAGACCTTGCACATTCTCGAATTAGTGACATGCTCCAAGGGCATGGTGGTAATGTGTCTGCAACAGAACTGGAAAGTTTGGATCCTCAATATCCAAATTTACATGTGAGAAATTCATGGAACTTTGAAAATCAAAGAGAGGAGCCAAATGTATTAAGTCTTGACGGTGAAGAGAGTGTCAGGTCTTTTGATGCATCTCAATATTCAGATGGACATAGTTTCAGTTCTGATGAGAACTTATTCCAACTTCCTGACCTTGAAAAGAATCTTCTGGTCAGAAGTTCTTCCCCAGGGCTTCCTAATGATTTGGATCAGAAAAATGTTGATGATCAGCATGAAGAGGACAATTGTAAGGAAGTTAGGTGCATTGAGTTAGAAGACCTAGTTACAAACACTCGTACACACTCAAACCAAGCAGATTCAAGATCAAGCACATGCACTGATTCTAATGCATCATCTCCTAGCGCAAACACAGCTCTCTCAGGATTGATTGTAGTTGGTAATAGAGAGAAGGAAAAGCTAGATTCTTGTCCATCTGTGTTAAAGGAAGACAGGAGGTTGAACCATTTGCACCAAGATTTTGTTCTTCCCTCTCCAAAAGAAATTTCTGTGTGCATGACAGGAAACAGTACTAGTAGTTCTAGAAACTTGAAGTTGAGCTTGAGCCGAAGTAGAAGTTGTAAGGCAAGTTTCATGAGGAAGTTATCTTCAGATTGGTTTGATGATGAAGATGTAATTCAGAGCACACCCCCAATAGGGAATGAAAGAAACTTTGCTGGAAGACCTGAGAGCGTTCTGAAGAAGATTTGTGCACTAAATTATAATGCCAATGCAGGAAGGCATTCATGTAATGGCCTTGGGAATTCTGTGGAAAATTCTGCTGTTGATGATGTACAGCATGTAAAATCCTATGAGGGTAATAGGCCCTTGGCACCAAAAGGAAAGGAAACGGAAAATCTTGAGAACATAAATTTACTTGCTGACCATAAGATTCTGGGGACAGGATTGGATCCCAAAATGTCTACAAACGATGTCAAAGACATTGGATTGGACCTAATGCAAGCTGATGGAGAAAGTCATTTAGACTGGCCTTCAAAATTCAAGAGGCTGCAAAGAGAGATCATTGAATTCTGGAATGCTTGTAATGTTTCATTGGTTCACAGGACTTACTTTTTCCTTTTATTCAAAGGGGATCCATCAGATTCTATTTACATGGAGGTAGAGCTTAGAAGGCTATCATACCTTAAGCAAACGTTTTCCCAAGGCAATCAGATAGTGGAAGATGGACGAACCCTCACACCTGAGTCAAGCATGAGATACCTTAGAAAAGAGAGGCAAATGTTGAGCAAGCAAATGCATAAGCGGCTGTCTAAATATGATAGACAGAACCTTTACTTGAAATGGGGCCTTCGTTTGAGTTCAAAGCATAGGAGTTTGCAATTGGCCCATCAATTGTGGAGCGACACAAATGACATGGACCACGTTAGAGACAGTGCATCAATTGTTGCAAAGTTGGTTGGTTTAGTAGAGCCAGAACAAGCATTTAAGGAGATGTTTGGACTCAACTTTGCCCCACAACCCACAAGTAGGAAATCTTTTAGTTGGACAGCCAGTGTAAGGCATATTTTGTGA 2859 0.4176 MGSVGGEDAIQEPHGHEERILVSVRLRPLNKMELARNDVSDWECINDTTIIYRSNLSAPDRSLYPTAYSFDSVFRSDCSTRQVYEKAAKEVALSVVGGINSSIFAYGQTSSGKTYTMSGITEYTVADIFNYIEKHTEREFMLKFSAIEIYNESVRDLLSPDCTPLRLLDDPERGTVVEKLTEETLRDWNHFTELLSFCEAQRQIGETSLNEASSRSHQILRLTIESSAREFLGNDKSSSLSSSVNFVDLAGSERASQTNSAGTRLKEGCHINRSLLTLGTVIRKLSKGRNGHIPFRDSKLTRILQSSLGGNARTAIICTMSPARSHVEQTRNTLLFASCAKEVTTNAQVNVVVSDKALVKQLQKELARLEDELRNSGPAHLTSDTAALLRDKDRQIEMLKKEVKDLTLQRDLAHSRISDMLQGHGGNVSATELESLDPQYPNLHVRNSWNFENQREEPNVLSLDGEESVRSFDASQYSDGHSFSSDENLFQLPDLEKNLLVRSSSPGLPNDLDQKNVDDQHEEDNCKEVRCIELEDLVTNTRTHSNQADSRSSTCTDSNASSPSANTALSGLIVVGNREKEKLDSCPSVLKEDRRLNHLHQDFVLPSPKEISVCMTGNSTSSSRNLKLSLSRSRSCKASFMRKLSSDWFDDEDVIQSTPPIGNERNFAGRPESVLKKICALNYNANAGRHSCNGLGNSVENSAVDDVQHVKSYEGNRPLAPKGKETENLENINLLADHKILGTGLDPKMSTNDVKDIGLDLMQADGESHLDWPSKFKRLQREIIEFWNACNVSLVHRTYFFLLFKGDPSDSIYMEVELRRLSYLKQTFSQGNQIVEDGRTLTPESSMRYLRKERQMLSKQMHKRLSKYDRQNLYLKWGLRLSSKHRSLQLAHQLWSDTNDMDHVRDSASIVAKLVGLVEPEQAFKEMFGLNFAPQPTSRKSFSWTASVRHIL 952
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca06g01284 952 Pfam Kinesin motor domain 25 343 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Cca06g01284 952 MobiDBLite consensus disorder prediction 501 524 - -
Cca06g01284 952 ProSitePatterns Kinesin motor domain signature. 242 253 IPR019821 GO:0003777|GO:0005524|GO:0007018
Cca06g01284 952 PANTHER CENTROMERE PROTEIN E 2 952 - -
Cca06g01284 952 MobiDBLite consensus disorder prediction 542 566 - -
Cca06g01284 952 Coils Coil 389 416 - -
Cca06g01284 952 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 19 375 IPR027417 -
Cca06g01284 952 PRINTS Kinesin heavy chain signature 98 119 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Cca06g01284 952 PRINTS Kinesin heavy chain signature 207 224 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Cca06g01284 952 PRINTS Kinesin heavy chain signature 243 261 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Cca06g01284 952 PRINTS Kinesin heavy chain signature 293 314 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Cca06g01284 952 CDD KISc_CENP_E 20 343 - -
Cca06g01284 952 Gene3D Kinesin motor domain 10 374 IPR036961 -
Cca06g01284 952 ProSiteProfiles Kinesin motor domain profile. 19 343 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Cca06g01284 952 SMART kinesin_4 17 351 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Cca06g01284 952 Coils Coil 352 372 - -
Cca06g01284 952 Pfam Domain of unknown function (DUF3490) 775 935 IPR021881 -
Cca06g01284 952 PANTHER ATP-BINDING MICROTUBULE MOTOR FAMILY PROTEIN 2 952 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca06g01284 Cca-Chr6 27516085 27524309 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca06g01284 12 373 Miscellaneous Gene Families AT5G06670 43.514 9.29e-84 283
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca06g01284 K11498 - gmx:100809766 1628.61
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca07g00088 07 1184533 1190453 Cca06g01284 06 27516085 27524309 ECH
Cca06g01284 06 27516085 27524309 Cca06g01284 06 27516085 27524309 ECH
Cca04g00372 04 3746280 3754184 Cca06g01284 06 27516085 27524309 ECH