Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g01663 ATGGCCGAGCCCCCTGCAACGCCGGACACGACGGAAGTGACATCCGGGTTCGGTTTCGGAACCGGTTCGGGTCAGAAACCGGTTCAGGGGATAAGAAGAGTGGGTTTGAGAGCTGAAATAGATACTTCGCCGCCGTTTGGGTCTGTTAAGGAAGCGGTTACCCGTTTTGAAGGAAGCGAACCTTGGATGCCCCTTTGCAAGTTTGGAGAGGCCTATAACAGTATTGAAGACTTTGACATAAAGAGGGTGGAGGAGGAAGCCGCGAAGTTGGAAAAGGATTTGATAGTGAAAGAACTCGAAACACTTGATGTGCTTGAAGAACTGGGTGCTACCAAAGCTATTTTGGAGGAATTGAAGCGGCAGCTGCAATCAGAAGCATTGAATTGTTTTGCAGCTCCAGGTTGTGAAGAGGTTGGAGATCCTGTTAAAAATTGTGTGAATGATCTCAACAATCAAGAACAGACATTGCATGATAGTGCTACTTCATCACCTGATCTGTTCTTAATGGAGTTAAAACAAGCTAAAGTGAACCTTGGCAAAACTATAAATGATCTTGGAGTGATACAATCTTCTGTTGAGACTTTGAATAAGAAGATGAAGAAGGAGAGGCTTTTTCTTGGGAGGACGCGTGAGAAGCTAGCATCAAAGTTTGCAGATATCTCTACTCAAGAAGTAGCCACAAAAGAAGTAAGGTTAAATCCACCACCAGCTCCTGAAGGAACAAGTTGCACTTGTTGTCATGATCCCCTAAATGTTGTAAGGAGTTTCAAATTTGATACTGGACAGTGCAATGGAATGAGTGAAACAAGAAGTTCTAAAGCTTCAACGCCCTTGTCTGAGTTTGGAGAGAATGGATTTAGTATTAAAACTGCTGAGATGAGGTGGTTTGCAGCTAAAAAGATGGAAGAAGCTGCAATGGCAGCAGAAGCTGTTGCTCTTGCCGAAATTGAGGCTCTATGTAATTGTAACCCTGAGATATCATCAGAATCTGCTCTTCAAGAACACCACAAAGTGACCTTTGCCAATCCCATAGCTCAAATTCCTCAAGAGTCAACCTTGAAGGAGGTAATAGACTCCAAGTTCGAAATTGAGAAAATAGGTTCTTCTAAACTGAGTGTTTTGAAAAAGTTGGAGGAAGCAACAGAAGAAGTTCTACGCAGCAAACAAGTCTTGACTGAGGCATTAAACAGTGTTGAAAGTGCAAACAGAAAGCAACTTGCTGCCAGGGAGGCTCTTCAAAGATGGATTCCTGAGGATGATCTAAAGGGTGAGCCAGTGTATGACTATGTTAAGCACAACAAGTTCAATCAAGCTGGAAATTATCAGGATTCTCTTCAGTCAGTGAAGAAGGATCCGAAACCGATCTTAAAGTCTTCAATTTCAATGAGAGATGTGCTCAGCAGAAAGCAAGTTCCTGAAGATTACACTACCACAAAGGAGATGGAAGAGCACCCTGAAAGAAGGGTAGCATTTAGTCAAATGCTTCGAGCATTGAGGGAGGATCAAACTCTACCTACAATACCCGAGAAAGATGGGAGCAATCAAAAGCAGTTCATAGCACAAAGGAAAAAGTTTGGATTCATCCAAATATCACTCCCTTTGGGAAAGCGAAAATTTGTGACTCTGATTTTATTCCTCCTCCCCGAACTTCCTCCGCCACGTTCAAGCCGCCCTGAAACGACACCGTCCCCTCGGTACAATGCACTCCAATTCCATAAGGCCACGTCGCACGCTGCTTCCTCAACGAACCAACTCTCTACAACAACCACCACCACCTTCTTCTCACAACCTAGATCCTCACAAGAAAGTCCACTTTTCAACTCCAACCACCACTGCTTCGCAGGATTCCATGAAGCTGCTAGGAGGTTAAGCGTGGAGCCTTCCAGTTGTCTTGTCATTGAAGACTCTTTATTGTTGACAGGGAATCACAAGGACATAAGTTCCTCTCAAGAGAATATATTCAACCCCAGTGGTGAAAGACTTTTTCGGAGACGCAAAGGAATCTTTTGGGAAGATAACATTACTGGCACTACTGCAACAGAGGATTCAGACGAAGATACAAAAGAAAAAGCCAAAACACTAGAAGGTCGGTCTCTAACAACTAAGAAGTTTGGAAGTGTGGCTGATACGCAACGCTGTGATAGAAAGATGGATGGCAATGGTAATGGTAATGCTAAGAGACTGAAGGTCATGCATGGGAAGCCACGTGTCCCTCACAACTATCCCAGATATGCCAACTTCCCACTTTCGCCCTATCGTCTCTTTATGAAAAGCTTCATGAGAGGTTGTGACTCGAAGAATTATATGGAAACTGATAGAGCAAGATTTGAAAAATGGATAAGCATGACTAATGAAGTACAAGATGAGGTTGAATCACCAATGGTTAGGAAGATTGATAAGGTATGCTGA 2409 0.4346 MAEPPATPDTTEVTSGFGFGTGSGQKPVQGIRRVGLRAEIDTSPPFGSVKEAVTRFEGSEPWMPLCKFGEAYNSIEDFDIKRVEEEAAKLEKDLIVKELETLDVLEELGATKAILEELKRQLQSEALNCFAAPGCEEVGDPVKNCVNDLNNQEQTLHDSATSSPDLFLMELKQAKVNLGKTINDLGVIQSSVETLNKKMKKERLFLGRTREKLASKFADISTQEVATKEVRLNPPPAPEGTSCTCCHDPLNVVRSFKFDTGQCNGMSETRSSKASTPLSEFGENGFSIKTAEMRWFAAKKMEEAAMAAEAVALAEIEALCNCNPEISSESALQEHHKVTFANPIAQIPQESTLKEVIDSKFEIEKIGSSKLSVLKKLEEATEEVLRSKQVLTEALNSVESANRKQLAAREALQRWIPEDDLKGEPVYDYVKHNKFNQAGNYQDSLQSVKKDPKPILKSSISMRDVLSRKQVPEDYTTTKEMEEHPERRVAFSQMLRALREDQTLPTIPEKDGSNQKQFIAQRKKFGFIQISLPLGKRKFVTLILFLLPELPPPRSSRPETTPSPRYNALQFHKATSHAASSTNQLSTTTTTTFFSQPRSSQESPLFNSNHHCFAGFHEAARRLSVEPSSCLVIEDSLLLTGNHKDISSSQENIFNPSGERLFRRRKGIFWEDNITGTTATEDSDEDTKEKAKTLEGRSLTTKKFGSVADTQRCDRKMDGNGNGNAKRLKVMHGKPRVPHNYPRYANFPLSPYRLFMKSFMRGCDSKNYMETDRARFEKWISMTNEVQDEVESPMVRKIDKVC 802
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g01663 802 Pfam Weak chloroplast movement under blue light 38 123 IPR008545 -
Cca05g01663 802 PANTHER HEAVY CHAIN, PUTATIVE, EXPRESSED-RELATED-RELATED 5 537 - -
Cca05g01663 802 PANTHER WEB FAMILY PLANT PROTEIN 5 537 - -
Cca05g01663 802 Coils Coil 80 100 - -
Cca05g01663 802 Coils Coil 374 394 - -
Cca05g01663 802 MobiDBLite consensus disorder prediction 1 28 - -
Cca05g01663 802 MobiDBLite consensus disorder prediction 8 22 - -
Cca05g01663 802 Coils Coil 105 125 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca05g01663 Cca-Chr5 36006286 36023292 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca05g01663 - - gmx:100806885 757.673
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca05g01663 05 36006286 36023292 Cca01g02003 01 46854257 46857337 ECH
Cca05g01663 05 36006286 36023292 Cca05g01663 05 36006286 36023292 ECH
Cca01g00228 01 2376154 2379396 Cca05g01663 05 36006286 36023292 PCT