Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g01649 ATGGTTTTGGTTGATAATGGTAAAGATGAAATTGAGGAATCTAATGGAAGTAAAATAGAGGAGTTTGTCTCCGTAGATATTTCATCTTCTCGAAGAACATTGGTCGGCAATGAAAATCCTCAAAGAAAGTTTGAGGGCACCTTGAGTTCTATTCCCAATAGGATCAAATTCTTGAAATTTGGTTCTGCATCTGCGAAATTCAAGAGGCTGGCTACCGAGAAGGACCAGATTTCACAATCGGTGCCTTCCCCAGGTTCTAATCGCTTAAGGGAGCGCTTCAGTGGCATGTTTGCTAAGAAACTAGACTGGGGTTCACTGAAGAAGATGTGTGTGGAATGGATTAGGGATCCAATGAACATAGCCCTTTTTGTGTGGATCTTGTGTGTCGCTGTTTCAGGTGCAATTCTGTTCCTTGTTATGACTGGCATGTTGAATGGTGTGCTGCCAAGGAAGTCCCAGAGGAATGCATGGTTTGAAGTGAACAATCAAATACTCAATGCATTGTTTACACTGATGTGTTTGTATCAACATCCAAAGAGGTGTTACCATCTTGTACTTCTGTGCAGGTGGAGTCCACAAGATATCTCAAGGCTTAGAAAGGTTTATTGCAAGAATGGGACTTATAAGCCCCATGAGTGGGCACATATGATGGTTGTGGTCATTCTCCTTAATGTGAACTGTTTTGCTCAATATGCACTTTGTGGTCTAAACTGGGGCTATAAAAGATCCGACCGCCCCGCCATAGGAGTTGGAATATGCATATTTTTTGCAATAGGTGCGCCCGCAATCTCTGGTCTGTACACCATTCTTAGCCCTCTAGGTAAAGATTATGATTCTGAGATGGATGAAGAAGCACAGGTTCAAGCTTCTGTTGCTCAGAAGCAAGAACAGCTGAGAGTGAAGTCATTTGAGAAGAAATATTCATTTGCATCCACACAGCAACGAAGGGTTATTGAAAATAATCCACAGTGGAGTGGAGGAATACTTGACATTTGGAATGATATTTCTCAAGCATATCTATCACTTTTCTGCACTTTTTGTGTCTTTGGTTGGAACATGGAGAGACTTGGCTTTGGAAACATGTATGTTCATATTGCTACTTTTATGCTCTTCTGTATGGCTCCCTTTTGGATTTTTATCTTGGCTGCTGTTAATATTGAGGATGACACTGTTAGGCAGGCTCTAGTAGCTACTGGGATCATTCTATGTTTTTTTGGTTTATTGTATGGTGGCTTCTGGAGGATCCAAATGAGAAAAAGATTCAATTTGCCTTCTTATAACTTCTGTTTTGGCAAGCCTTCAGCTTCTGATTGCACACTTTGGCTCTGCTGTAGCTGGTGCTCTCTTGCTCAAGAAGTGAGAACAGGGAATAGCTATGTCATTGTAGAAGATAAGTTATACAGGAAAGATGTTTATAATAGTGATCAACAGCCAATATCACCTTTACCTCGTGAAGATGTAGCATCAGCAAAATCTGGCACAAGTTCTCCTTTGGGTAACAACTCTTCCCCTTCTATGATGAAGCCATCTAGTCCTCTAAGTTCAAGCAGTTTCGTTAAGGGATATTATAGTCCAGAGAGGCCACTACCTACTGTACAAGAAGAGTTTCCTGAAAGAGGTAAAGATGCAACAATGAACCCACCAAGTCCTCTATCAATACATAGAGAATCTCCTTAG 1677 0.4114 MVLVDNGKDEIEESNGSKIEEFVSVDISSSRRTLVGNENPQRKFEGTLSSIPNRIKFLKFGSASAKFKRLATEKDQISQSVPSPGSNRLRERFSGMFAKKLDWGSLKKMCVEWIRDPMNIALFVWILCVAVSGAILFLVMTGMLNGVLPRKSQRNAWFEVNNQILNALFTLMCLYQHPKRCYHLVLLCRWSPQDISRLRKVYCKNGTYKPHEWAHMMVVVILLNVNCFAQYALCGLNWGYKRSDRPAIGVGICIFFAIGAPAISGLYTILSPLGKDYDSEMDEEAQVQASVAQKQEQLRVKSFEKKYSFASTQQRRVIENNPQWSGGILDIWNDISQAYLSLFCTFCVFGWNMERLGFGNMYVHIATFMLFCMAPFWIFILAAVNIEDDTVRQALVATGIILCFFGLLYGGFWRIQMRKRFNLPSYNFCFGKPSASDCTLWLCCSWCSLAQEVRTGNSYVIVEDKLYRKDVYNSDQQPISPLPREDVASAKSGTSSPLGNNSSPSMMKPSSPLSSSSFVKGYYSPERPLPTVQEEFPERGKDATMNPPSPLSIHRESP 558
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g01649 558 Pfam PLAC8 family 324 454 IPR006461 -
Cca05g01649 558 MobiDBLite consensus disorder prediction 477 558 - -
Cca05g01649 558 Pfam Protein of unknown function (DUF2985) 112 190 IPR021369 -
Cca05g01649 558 TIGRFAM A_thal_Cys_rich: uncharacterized Cys-rich domain 323 455 IPR006461 -
Cca05g01649 558 PANTHER - 12 556 - -
Cca05g01649 558 PANTHER PLAC8 FAMILY PROTEIN-RELATED 12 556 - -
Cca05g01649 558 MobiDBLite consensus disorder prediction 489 521 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca05g01649 Cca-Chr5 35883948 35886728 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca05g01649 - - gmx:100795088 1001.89
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca05g01649 05 35883948 35886728 Cca01g01983 01 46262606 46265408 ECH
Cca05g01649 05 35883948 35886728 Cca05g01649 05 35883948 35886728 ECH
Cca01g00242 01 2514349 2516893 Cca05g01649 05 35883948 35886728 PCT