Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g01629 ATGCTTCTCCGAACCGTCGCTACTTCTGCTTCTGGTTCTGCTTCGTCCCTATCTCTCTTCAGCCCGAACGCCGAACCTTCGCGTTCGCTTTCCGTTCGCGCGAAAAACGCTCGTGGATTGGTGGTTTTCGCCGCCAAAGGATCCACGAACCACCGTGCCTTAACCGGCGTTATTTTCGAACCGTTCGAGGAGGTGAAGAAAGAACTCGATCTCGTTCCCACCGTTCCACAAGCCTCTCTCGCACGCCAGAAATTCGTTGACGAATCTGAAGCTGCCGTTAACGAACAAATCAATGTGGAGTATAATGTCTCGTATGTTTATCATGCTCTGTTTGCGTACTTCGATAGAGACAACGTTGCGCTGAGAGGTCTTGCTAAGTTTTTCAAGGAATCGAGTGAAGAGGAAAGAGAGCATGCTGAGAAATTCATGGAGTATCAGAATAAACGTGGTGGAAAAGTGAAGCTGCAGTCAATTGTGATGCCGCTTTCTGAGTTTGATCATGCAGAGAAGGGAGATGCGCTGCATGCAATGGAACTCGCTCTCTCATTAGAGAAGCTAACGAACGAAAAGCTCCTTAACTTGCACAGTGTTGCCAACAAGAACGGTGACGTGCAGTTGGCAGACTTTGTGGAAAGTGAGTTCCTGGGTGAACAGGTGGAAGCTATCAAAAGATTATCCGAGTATGTTGCTCAGCTCAGGAGAGTTGGCAAAGGACATGGTGTGTGGCACTTTGATCAGATGCTGCTTCACGAGGGACATGCAGCTTGA 768 0.487 MLLRTVATSASGSASSLSLFSPNAEPSRSLSVRAKNARGLVVFAAKGSTNHRALTGVIFEPFEEVKKELDLVPTVPQASLARQKFVDESEAAVNEQINVEYNVSYVYHALFAYFDRDNVALRGLAKFFKESSEEEREHAEKFMEYQNKRGGKVKLQSIVMPLSEFDHAEKGDALHAMELALSLEKLTNEKLLNLHSVANKNGDVQLADFVESEFLGEQVEAIKRLSEYVAQLRRVGKGHGVWHFDQMLLHEGHAA 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g01629 255 PANTHER FERRITIN 2 254 - -
Cca05g01629 255 Gene3D - 51 252 IPR012347 -
Cca05g01629 255 ProSiteProfiles Ferritin-like diiron domain profile. 83 236 IPR009040 -
Cca05g01629 255 CDD Euk_Ferritin 87 246 - -
Cca05g01629 255 ProSitePatterns Ferritin iron-binding regions signature 2. 203 223 IPR014034 -
Cca05g01629 255 SUPERFAMILY Ferritin-like 77 250 IPR009078 -
Cca05g01629 255 PANTHER FERRITIN 2 254 IPR001519 GO:0006826|GO:0006879|GO:0008199
Cca05g01629 255 Pfam Ferritin-like domain 91 235 IPR008331 GO:0008199
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca05g01629 Cca-Chr5 35692155 35694385 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca05g01629 K00522 - gmx:547477 414.846
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca05g01629 05 35692155 35694385 Cca01g01938 01 45262949 45265788 ECH
Cca05g01629 05 35692155 35694385 Cca05g01629 05 35692155 35694385 ECH
Cca01g00262 01 2770321 2773087 Cca05g01629 05 35692155 35694385 PCT