Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g00262 ATGCTTCTCAGAACCGCTCCTCCCTCTTTCTCTCCCCTCAACCCTTCTTCTTCTTGTACCACTCGCCACTCTCACCCCAAAACCTTCCTCCCCTGCGCCACCAAGGGCTCCAACAACCGCCCCTTAACCGGCGTCGTTTTCGAACCCTTTGAAGAGGTCAAGAAGGAGCTCGACCTCGTTCCCACTCTCCCGCAAGCTTCCCTCGCACGCCAAAAGTACTCACACGACTGTGAGGCCACTATTAACGAACAGATCAATGTGGAGTACAATGTTTCCTACGTTTATCATGCCATGTTTGCCTACTTCGACAGGGACAATGTTGCACTCAAGGGTCTCGCCAAGTTCTTCAAGGAGTCAAGCGAGGAGGAAAGGGAGCATGCAGAGAAACTGATGGAATATCAGAACAAAAGGGGTGGGAAAGTGAAGTTGCAATCAATAGTGATGCCACTTTCTGAGTTTGATCATGAGGAAAAGGGAGATGCGCTATATGCAATGGAACTTGCTCTGTCGTTGGAGAAGCTAACAAATGAGAAGCTGCTTAACGTGCACAGTGTTGCCTCAAAAAACAATGATGTGCAATTGGCAGATTTTATTGAAAGCGAGTTTTTGGGTGAACAGGTGGAAGCCATAAAAAAAATCTCTGAGTACGTTGCTCAGCTAAGAAGAGTTGGCAAAGGACATGGTGTGTGGCACTTTGATCAAATGTTGCTTCATGAGGAGGGAGTTGCTGCTTGA 735 0.4789 MLLRTAPPSFSPLNPSSSCTTRHSHPKTFLPCATKGSNNRPLTGVVFEPFEEVKKELDLVPTLPQASLARQKYSHDCEATINEQINVEYNVSYVYHAMFAYFDRDNVALKGLAKFFKESSEEEREHAEKLMEYQNKRGGKVKLQSIVMPLSEFDHEEKGDALYAMELALSLEKLTNEKLLNVHSVASKNNDVQLADFIESEFLGEQVEAIKKISEYVAQLRRVGKGHGVWHFDQMLLHEEGVAA 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g00262 244 CDD Euk_Ferritin 74 234 - -
Cca01g00262 244 Gene3D - 40 241 IPR012347 -
Cca01g00262 244 MobiDBLite consensus disorder prediction 9 23 - -
Cca01g00262 244 ProSiteProfiles Ferritin-like diiron domain profile. 71 224 IPR009040 -
Cca01g00262 244 SUPERFAMILY Ferritin-like 65 238 IPR009078 -
Cca01g00262 244 PANTHER FERRITIN 32 242 - -
Cca01g00262 244 Coils Coil 116 137 - -
Cca01g00262 244 ProSitePatterns Ferritin iron-binding regions signature 2. 191 211 IPR014034 -
Cca01g00262 244 PANTHER FERRITIN 32 242 IPR001519 GO:0006826|GO:0006879|GO:0008199
Cca01g00262 244 MobiDBLite consensus disorder prediction 1 23 - -
Cca01g00262 244 Pfam Ferritin-like domain 79 223 IPR008331 GO:0008199
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca01g00262 Cca-Chr1 2770321 2773087 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g00262 K00522 - gmx:547476 408.683
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca01g00262 01 2770321 2773087 Cca05g01629 05 35692155 35694385 PCT