Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g01080 ATGAGTTCAGCAATTAAAGCTTGGACCGTTGCAGCTAGCGTTGGAGTTGTGGAGGCCTTAAAAGACCAAGGTATCTGCAGGTGGAACCATGCTTTAAGATCAGTTCAACAGCATGTCAAAAGCCACGTTGATGTTGGTTCATTCTCTCAGACAAAGAAGCTTTCTTCATCCTCTTCTAGTTCTTCTGCTATGCTCTTCACAGGGCTAAAAAAGGAGAAGGCTAAGCAGTCAGAGGAGTCATTCAAGACGGTTATGTACTTAAGCTGCTGGGGTCCCAATTAG 282 0.4468 MSSAIKAWTVAASVGVVEALKDQGICRWNHALRSVQQHVKSHVDVGSFSQTKKLSSSSSSSSAMLFTGLKKEKAKQSEESFKTVMYLSCWGPN 93
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g01080 93 Pfam Wound-induced protein 10 92 IPR022251 -
Cca04g01080 93 PANTHER WOUND-RESPONSIVE FAMILY PROTEIN 1 93 - -
Cca04g01080 93 PANTHER DUF3774 DOMAIN PROTEIN-RELATED 1 93 IPR022251 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca04g01080 Cca-Chr4 12088229 12089242 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca04g01080 - - gmx:100818450 128.257
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca04g01080 04 12088229 12089242 Cca04g01080 04 12088229 12089242 ECH
Cca10g00810 10 9337854 9338453 Cca04g01080 04 12088229 12089242 PCT
Cca04g01080 04 12088229 12089242 Cca10g00808 10 9328596 9329374 PCT