Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca10g00810 ATGAGTTCAGGAAGCAGAACTTGGGGTGTGGCAGCTAGTGTTGGAGTTGTAGAGGCCTTGAAGGACCAGGGCTTGTGCAGGTGGAATAGTGTTTTAAGATCTGCACAACATCAACTTAAGAACCATGTGAGATCTTTGTCTCAGGCAAAGAAGGTTTCTTCCTCTTCTTTTTCTAACGTTTCCAGCAGATTAAAGGAAGAGGGTGTAAAGCAATCAGAAGAGTCCTTCAGGACAGTCATGTACTTAAGCTGTTGGGGTCCCAATTAG 267 0.4457 MSSGSRTWGVAASVGVVEALKDQGLCRWNSVLRSAQHQLKNHVRSLSQAKKVSSSSFSNVSSRLKEEGVKQSEESFRTVMYLSCWGPN 88
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca10g00810 88 PANTHER WOUND-RESPONSIVE FAMILY PROTEIN 1 88 - -
Cca10g00810 88 Pfam Wound-induced protein 10 87 IPR022251 -
Cca10g00810 88 PANTHER DUF3774 DOMAIN PROTEIN-RELATED 1 88 IPR022251 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca10g00810 Cca-Chr10 9337854 9338453 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca10g00810 - - gmx:100815403 132.109
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca10g00810 10 9337854 9338453 Cca10g00810 10 9337854 9338453 ECH
Cca10g00810 10 9337854 9338453 Cca04g01080 04 12088229 12089242 PCT