Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g00812 ATGGAAAAGCTTGCTAAGCAGGTTCTGATTTGCAGTTTATTAATGGCACTTGTTTTGCTATCATGCCCAATAATAATGTCTCAAGAAGTTGAGGACGAAAGCGAGTTTAACTATGATGTAAAGAGTGAGATAGGACCATTTAATTGGGGAGACATTAAACCCGAATGGAGTAAATGCAAAAATGGATCCATGCAATCACCGATTGATTTGTTGAATGAGAGGGTTCAAATAGTATCCCATTTGGGAACACTTCAGATGAACTACCGGCCATCCAATGCAACTCTTAAGAATAGGGGTCATGATATCAAGCTGGCATGGCTTGCGGGCACAAGCTATCTACAAATCAATGGAACTCAGTATGTACTAAAACAGTTCCATTGGCATTCTCCCTCTGAACACACCATAGATGGCAAAAGGTTGGATCTTGAGTTACACATGGTGCACGAAACTCCATCAGGACAAACTGCAGTTATTGGAATGTTGTATAAAGTTGGAACAGTACCAGATCCTTTCTTGGCATTGTTGACGAAGCACTTGGTAACCATTTCCAATAGTACGGGAGCAGAAAAAGATGTGGGTGTAATGGATCCTAGACTGGTTAAAATAAGCATTAGCGGAACACAGTATTACAGATACGTGGGTTCATTGACTACCCCTCCGTGCACTGAGGATGTTTCTTGGACCATACTTAGAGAGATGAGATCCGTTTCAAGGGAGCAAATCAGATTGCTTCGAGAAGCCGTTCATGATGATTCAGGTGTTAATGCAAGACCATTGCAGCCAATAAACAACCGCTTTGTGCTGCTCAATAAGCCGAAAGATCCACGTTAA 831 0.4176 MEKLAKQVLICSLLMALVLLSCPIIMSQEVEDESEFNYDVKSEIGPFNWGDIKPEWSKCKNGSMQSPIDLLNERVQIVSHLGTLQMNYRPSNATLKNRGHDIKLAWLAGTSYLQINGTQYVLKQFHWHSPSEHTIDGKRLDLELHMVHETPSGQTAVIGMLYKVGTVPDPFLALLTKHLVTISNSTGAEKDVGVMDPRLVKISISGTQYYRYVGSLTTPPCTEDVSWTILREMRSVSREQIRLLREAVHDDSGVNARPLQPINNRFVLLNKPKDPR 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g00812 276 PANTHER CARBONIC ANHYDRASE 23 274 IPR023561 GO:0004089|GO:0008270
Cca04g00812 276 CDD alpha_CA_prokaryotic_like 45 269 IPR041891 -
Cca04g00812 276 Gene3D Alpha carbonic anhydrase 32 274 IPR036398 -
Cca04g00812 276 PANTHER BIFUNCTIONAL MONODEHYDROASCORBATE REDUCTASE AND CARBONIC ANHYDRASE NECTARIN-3 23 274 - -
Cca04g00812 276 SMART Carb_anhydrase_2a 38 271 IPR001148 -
Cca04g00812 276 SUPERFAMILY Carbonic anhydrase 35 268 IPR036398 -
Cca04g00812 276 Pfam Eukaryotic-type carbonic anhydrase 46 269 IPR001148 -
Cca04g00812 276 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 22 - -
Cca04g00812 276 ProSiteProfiles Alpha-carbonic anhydrases profile. 34 271 IPR001148 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca04g00812 Cca-Chr4 8269880 8272602 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca04g00812 K01674 - gmx:100811978 484.567
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca10g00533 10 5687848 5691619 Cca04g00812 04 8269880 8272602 PCT
Cca04g00812 04 8269880 8272602 Cca10g00534 10 5707479 5710029 PCT