Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca10g00533 ATGGATCGTGTCATGGCTTTCCATGTCTTTGCTTTCAGTTTATTCACGGTGATCGTTTTGCTCTTTCACCCGGCAAAGTGTGATGATGAGTATAATTATGATCTTTCAAGCAAGAAAGGGCCACTTAACTGGGGAAATATTAAAGAAGAATGGTTTTTGTGTAAAAATGGAACAAGGCAATCCCCTATCAACCTGCAGGGAAACAGGGTGAATGTGGTGTTCAATTCTTCAGGGATTCAAAGAAACTATCAACCCGCCAACGCCAACCTTATTAGTACGGACCATGACGTAATGGTAAATTGGACTGAGAACGCAGGATATATTATAATTAACGGAACACAATACCAACTCATACAGTGTCATTGGCATTCTCCCTCTGAACACACAATTAATGGCATAAGGTATGATCTAGAGTTACATTTGGTGCATATAAGTTCAAATGAAAACATTGCAGTGATTGGACTTCTTTATGAGACTGGGAACCAAGATCAGTTCATATCAACGATAGAAGATGATTTAAGATTGATGGCTGCAAACATAACCAATATAACACAACTAGGTGTGGTTGACCCAGAGCAGATAGCAGGGATAACAGGCGACAAATATTTTAGATATAATGGTTCTCTTACAGTTCCTCCATGCCATGAAAATGTTACATGGACCGTTTATACTAAACAGAACAAAACAGCTGGACGGGAACAAATCAAGTTGCTTCAAGCAGCCGTCAATGGGGATGAAACGTACACGAATTCTAGACCTTTGCAACAACTAAATAATCGCTCAGTGCTACTCTACGTACCTAAAGATCGCGAAGGATACTGA 822 0.3978 MDRVMAFHVFAFSLFTVIVLLFHPAKCDDEYNYDLSSKKGPLNWGNIKEEWFLCKNGTRQSPINLQGNRVNVVFNSSGIQRNYQPANANLISTDHDVMVNWTENAGYIIINGTQYQLIQCHWHSPSEHTINGIRYDLELHLVHISSNENIAVIGLLYETGNQDQFISTIEDDLRLMAANITNITQLGVVDPEQIAGITGDKYFRYNGSLTVPPCHENVTWTVYTKQNKTAGREQIKLLQAAVNGDETYTNSRPLQQLNNRSVLLYVPKDREGY 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca10g00533 273 ProSiteProfiles Alpha-carbonic anhydrases profile. 29 266 IPR001148 -
Cca10g00533 273 Pfam Eukaryotic-type carbonic anhydrase 40 263 IPR001148 -
Cca10g00533 273 SUPERFAMILY Carbonic anhydrase 31 263 IPR036398 -
Cca10g00533 273 SMART Carb_anhydrase_2a 33 266 IPR001148 -
Cca10g00533 273 CDD alpha_CA_prokaryotic_like 40 264 IPR041891 -
Cca10g00533 273 Gene3D Alpha carbonic anhydrase 27 271 IPR036398 -
Cca10g00533 273 ProSitePatterns Alpha-carbonic anhydrases signature. 126 142 IPR018338 GO:0004089|GO:0008270
Cca10g00533 273 PANTHER CARBONIC ANHYDRASE 6 268 IPR023561 GO:0004089|GO:0008270
Cca10g00533 273 PANTHER ALPHA CARBONIC ANHYDRASE 4-RELATED 6 268 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca10g00533 Cca-Chr10 5687848 5691619 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca10g00533 K01674 - gmx:102660002 365.155
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca10g00533 10 5687848 5691619 Cca04g00812 04 8269880 8272602 PCT