Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g02822 ATGAAGATGAGGTGTTCAATCATATTTCTTTGCATTCTAGCTTATGCGAATGTGACAGTTTCAGAGAAATTGTCACCCTACGATGTTCTCGAGAAATATGATCTTCCAGTGGGTCTTCTTCCGAAGGGTGCCACGGGGTATGAACTAAACGAAAAAAATGGGCACTTCACAGCGTATTTGAATGAAACGTGCATCTTCGGCATAAAGTCTTATGAGCTTAAGTACAAGTCCACCATCAAGGGAGTGATATCTAAGGGCAAATTGGCGAAGTTGAAGGGTGTTAGTGTGAAGGTTGAAGTGTTGTGGCTCAAAATCGTTGAGGTTACTCGTGACGGCGATGATCTTCAATTCTCTGTGGGTATTGCTTCTGCTGGATTTAGCGTCGACAGCTTTTCGGAGAGTCCTCAGTGTGGATGTGGATTCGTTTGCAACAGTTTCGATAAAAATGGTGATGTTTCTTCTCTTTAG 468 0.4274 MKMRCSIIFLCILAYANVTVSEKLSPYDVLEKYDLPVGLLPKGATGYELNEKNGHFTAYLNETCIFGIKSYELKYKSTIKGVISKGKLAKLKGVSVKVEVLWLKIVEVTRDGDDLQFSVGIASAGFSVDSFSESPQCGCGFVCNSFDKNGDVSSL 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g02822 155 PANTHER T31J12.3 PROTEIN-RELATED 7 150 IPR007493 -
Cca03g02822 155 Gene3D - 13 137 IPR036758 -
Cca03g02822 155 PANTHER DUF538 FAMILY PROTEIN 7 150 - -
Cca03g02822 155 SUPERFAMILY At5g01610-like 10 141 IPR036758 -
Cca03g02822 155 Pfam Protein of unknown function, DUF538 27 131 IPR007493 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g02822 Cca-Chr3 49566539 49567329 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g02822 - - gmx:100500136 268.855
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g02822 03 49566539 49567329 Cca03g02822 03 49566539 49567329 ECH
Cca02g01242 02 30355164 30356033 Cca03g02822 03 49566539 49567329 ECH
Cca03g02822 03 49566539 49567329 Cca02g01243 02 30360096 30362278 PCT