Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g01243 ATGATGTCTTCAATTAAAATCGTATGGATCCTGATGGTGTCTTTGGCAGCAGCATCATGCGCGTTGAGCCAATCCAAGAAGTTATCAGCGTACGATGTTCTGACGGAGTACGGGTTTCCGGTGGGTCTTCTTCCCAAAGGCGCCATAGGCTATTCGATCAACAGAGAATCCGGTGAGTTCGCAGTGTACTTCGACGGAAGCTGCACCTTCGACATAGAGTCATACTCGCTCAACTACAAGTCAACCATCACGGGAGTAATCACCAACGGTAGGCTCTACAAGCTCAAGGGTGTCACCGTCAAGGTCCTGCTCTTGTGGCTCAACATCGTCGAGGTCACGCGTCAGGGTGACGACATCTATTTCTCCGTCGGCATCGCTTCCGCCGATTTCGGCGTCGACAACTTCCTCGAGAGCCCCCAGTGCGGTTGTGGCTTCGATTGCAACAACCTCCCCCTAAACGGTCACGTTTCTTCCATTTAA 480 0.5188 MMSSIKIVWILMVSLAAASCALSQSKKLSAYDVLTEYGFPVGLLPKGAIGYSINRESGEFAVYFDGSCTFDIESYSLNYKSTITGVITNGRLYKLKGVTVKVLLLWLNIVEVTRQGDDIYFSVGIASADFGVDNFLESPQCGCGFDCNNLPLNGHVSSI 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g01243 159 Pfam Protein of unknown function, DUF538 30 135 IPR007493 -
Cca02g01243 159 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 20 - -
Cca02g01243 159 PANTHER T31J12.3 PROTEIN-RELATED 11 151 IPR007493 -
Cca02g01243 159 SUPERFAMILY At5g01610-like 6 147 IPR036758 -
Cca02g01243 159 Gene3D - 16 138 IPR036758 -
Cca02g01243 159 PANTHER DUF538 FAMILY PROTEIN 11 151 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g01243 Cca-Chr2 30360096 30362278 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g01243 - - gmx:100500182 258.455
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g02822 03 49566539 49567329 Cca02g01243 02 30360096 30362278 PCT