Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g02665 ATGGATAGAGTTAAGGACTTGGCATCAAAGAAGGCTGCTGTTATATTCACCAAGAGTTCATGCTGCATGTGTCACAGCATCAAACAACTTTTCTATGAGCTTGGAGCAAGCCCAGCAGTTCATGAGCTTGACAATGATTCCTATGGGAGGGAAATGGAGTGGGCCTTAAGGGGTATGGGCTGCAACCCTTCAGTCCCAGCAGTGTTCATAGGTGGAAAATTTGTGGGCTCATCCAAAGATATCATATCCCTCCATGTTGATGGCTCTCTCAAACAACTGCTCATGGATGCAAGGGCCATCTGGCATAAGTTGGTGTTGATTCCTCACCGCTCAATTTGGGCACCAGACTGCCAACCCAATATAGCCATTGGATCGAATTCGGTTAGGATTCGGTCTGATGGTTTGGGAGTTCTAGTGAGTCTAAGGAACAGGATTCTGTAA 441 0.4649 MDRVKDLASKKAAVIFTKSSCCMCHSIKQLFYELGASPAVHELDNDSYGREMEWALRGMGCNPSVPAVFIGGKFVGSSKDIISLHVDGSLKQLLMDARAIWHKLVLIPHRSIWAPDCQPNIAIGSNSVRIRSDGLGVLVSLRNRIL 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g02665 146 PANTHER GLUTAREDOXIN 1 102 IPR011905 -
Cca03g02665 146 Pfam Glutaredoxin 14 75 IPR002109 -
Cca03g02665 146 ProSiteProfiles Glutaredoxin domain profile. 1 101 - -
Cca03g02665 146 Gene3D Glutaredoxin 1 104 - -
Cca03g02665 146 PRINTS Glutaredoxin signature 72 85 IPR014025 -
Cca03g02665 146 PRINTS Glutaredoxin signature 58 71 IPR014025 -
Cca03g02665 146 PRINTS Glutaredoxin signature 13 31 IPR014025 -
Cca03g02665 146 SUPERFAMILY Thioredoxin-like 1 101 IPR036249 -
Cca03g02665 146 TIGRFAM GlrX-like_plant: glutaredoxin-like family 4 101 IPR011905 -
Cca03g02665 146 CDD GRX_GRXh_1_2_like 12 93 - -
Cca03g02665 146 PANTHER GLUTAREDOXIN-C1 PROTEIN 1 102 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g02665 Cca-Chr3 47951515 47954153 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca03g02665 1 101 Miscellaneous Gene Families AT4G15700 48.515 2.98e-34 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g02665 K03676 - gmx:100819447 206.453
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g02665 03 47951515 47954153 Cca03g02665 03 47951515 47954153 ECH
Cca03g02665 03 47951515 47954153 Cca02g01199 02 29664324 29664849 PCT
Cca02g01198 02 29646937 29647785 Cca03g02665 03 47951515 47954153 PCT