Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g02412 ATGCAGCGTCAAAGCCACATTTCGATTGCAATTTTACTTATGTCCGTCCTATTTTGCTCCACATTGACTAGAGCTCTTCAAGAACCTGAGTATGGTTATGATAAAAAGAGTGCAAAAGGGCCCCAACACTGGGGTGATCTTAAAGAAGAATGGGCAGCCTGCAAAATAGGGCAAAGTCAATCTCCTATTGATTTGTCAACAAGCAGAGTGGAAGTGATCCCCAAGTTAGGAGGGTTAAAGTACTGGTCCTATAAGCCTCAACCTGCTACTATCACCAACAGGGGTCAAGATGTTTCGGTAAACTGGGTAGGGGATGCTGGCTCAATAGACATAGATGGAACATCTTTCTTCCTCCAACAAGCCCATTGGCACTGGCCTGCCGAACATACCATCAATGGCCGAAGGTATGACTTGGAGTTGCACATGGTTCATGTTAGCCCACAGCCTGATGGAACAAACAAAACCGCTGTTGTTGGTATTTTGTACAAGTACGGTTCGCCCGATCCATTTCTCTCCGAGTTGGGAAAATACATAAAGGACATTCCTAATGAGGATGATGAGAAAAGCGTAGGAGTGATTGATCCCTCAGAAATGATGAGGGGTAGCAAGATGTACTACAGGTATTTGGGATCACTCACTGCACCTCCTTGCACTGAAGGCATCATTTGGACCGTTGATAAGAAGATAAGAACCGTTTCAAGGGGACAAGTGAAGTTATTCATGGATACAGTACTTGAACATTATGCCAGAAAGAATGCAAGGCCGTTGCAGCCCATAAATCATCGGGAGATACAACTTTACGTCCCAAAGCCAAAGAATAAACCTCTGTATTAA 834 0.4424 MQRQSHISIAILLMSVLFCSTLTRALQEPEYGYDKKSAKGPQHWGDLKEEWAACKIGQSQSPIDLSTSRVEVIPKLGGLKYWSYKPQPATITNRGQDVSVNWVGDAGSIDIDGTSFFLQQAHWHWPAEHTINGRRYDLELHMVHVSPQPDGTNKTAVVGILYKYGSPDPFLSELGKYIKDIPNEDDEKSVGVIDPSEMMRGSKMYYRYLGSLTAPPCTEGIIWTVDKKIRTVSRGQVKLFMDTVLEHYARKNARPLQPINHREIQLYVPKPKNKPLY 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g02412 277 SUPERFAMILY Carbonic anhydrase 30 264 IPR036398 -
Cca03g02412 277 ProSiteProfiles Alpha-carbonic anhydrases profile. 29 268 IPR001148 -
Cca03g02412 277 PANTHER CARBONIC ANHYDRASE 1 276 IPR023561 GO:0004089|GO:0008270
Cca03g02412 277 Gene3D Alpha carbonic anhydrase 28 273 IPR036398 -
Cca03g02412 277 SMART Carb_anhydrase_2a 31 268 IPR001148 -
Cca03g02412 277 CDD alpha_CA_prokaryotic_like 40 266 IPR041891 -
Cca03g02412 277 Pfam Eukaryotic-type carbonic anhydrase 40 265 IPR001148 -
Cca03g02412 277 PANTHER EUKARYOTIC-TYPE CARBONIC ANHYDRASE 1 276 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g02412 Cca-Chr3 45193917 45196852 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g02412 K01674 - gmx:100799362 494.967
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g02412 03 45193917 45196852 Cca02g00457 02 9704955 9708387 PCT
Cca02g00458 02 9719358 9722279 Cca03g02412 03 45193917 45196852 PCT