Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g00457 ATGAAGCATCAAAGCATAGTGTTTCTTCCGAATTTGCTAATACTAGTAACCATCCTACTCCATTCAACAACATGGATTAGTGCACAGGAAGTTGAGGATGAGAGTGAGTTTGATTACATAAAAGGGAGTGAGAAGGGTCCCTCACACTGGGGGGAACTGAAGAAGGAATGGGAAACATGTAAAAGTGGCACAATGCAATCTCCAATTGATTTGTCAAGCCACAGAGTGAGAGTGGTACCAAAGTTAGGGGAACTAAAGAAGTACTATAAGCCACAGAATGCCACTGTCAAGAACAGAGGCCATGATATTGAGGTGAAATGGGAGGGAGATGCGGGATCAATAAACATCAACGGCACTGAATATTTTCTGCATCAAGGGCACTGGCACTCACCCTCAGAACATACCATCAATGGCAGAAGGTATGATTTGGAGCTCCACTTGGTTCATGAAAGCAAAAGCACAAACGGAAAAGGCAAAATTGCAGTTGTTGGAGTTCTGTTTAAGATTGGTCGGCCCGATCCTGTTCTCAGCAAGTTGTCAAAATTCATAAAATCCATGGTGGATGAAGAAGGAGAAAATAGCATTGGGGTGATGCATCCCTCAGAAATTAAACTCGGTGGCAAGAACTACTACAGATACTTAGGTTCCCTCACTGTTCCCCCTTGCACTGAAGGTGTCATTTGGACTATCAATAAAAGGATAAGAAGTGTGTCAAGGGCACAAGTGAAGTTACTCAGAGAGGCTGTCCACGATCATGCAGAGAGGAATTCCAGACCTGTACAACCACTGAATCGACGAGAGATACAACTCTATGGCCCAAAACGGAAGGAGCAAAATTAA 840 0.4357 MKHQSIVFLPNLLILVTILLHSTTWISAQEVEDESEFDYIKGSEKGPSHWGELKKEWETCKSGTMQSPIDLSSHRVRVVPKLGELKKYYKPQNATVKNRGHDIEVKWEGDAGSININGTEYFLHQGHWHSPSEHTINGRRYDLELHLVHESKSTNGKGKIAVVGVLFKIGRPDPVLSKLSKFIKSMVDEEGENSIGVMHPSEIKLGGKNYYRYLGSLTVPPCTEGVIWTINKRIRSVSRAQVKLLREAVHDHAERNSRPVQPLNRREIQLYGPKRKEQN 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g00457 279 MobiDBLite consensus disorder prediction 253 279 - -
Cca02g00457 279 Gene3D Alpha carbonic anhydrase 33 277 IPR036398 -
Cca02g00457 279 ProSiteProfiles Alpha-carbonic anhydrases profile. 35 272 IPR001148 -
Cca02g00457 279 PANTHER ALPHA CARBONIC ANHYDRASE 3 11 275 - -
Cca02g00457 279 CDD alpha_CA_prokaryotic_like 46 270 IPR041891 -
Cca02g00457 279 PANTHER CARBONIC ANHYDRASE 11 275 IPR023561 GO:0004089|GO:0008270
Cca02g00457 279 ProSitePatterns Alpha-carbonic anhydrases signature. 132 148 IPR018338 GO:0004089|GO:0008270
Cca02g00457 279 SUPERFAMILY Carbonic anhydrase 36 268 IPR036398 -
Cca02g00457 279 Pfam Eukaryotic-type carbonic anhydrase 46 269 IPR001148 -
Cca02g00457 279 SMART Carb_anhydrase_2a 39 272 IPR001148 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g00457 Cca-Chr2 9704955 9708387 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g00457 K01674 - gmx:100797935 481.87
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca02g00457 02 9704955 9708387 Cca02g00457 02 9704955 9708387 ECH
Cca03g02412 03 45193917 45196852 Cca02g00457 02 9704955 9708387 PCT