Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g00458 ATGAAGCTTCGAAGAGACAACACTTACACCATTCCACATTTGTTCGTGCTTTTGATTATCTTGTTACATCCAGCATCAACAAGGGCTCAAGAAGTTGAGGACGAGAGAGAGTTTGATTACATTGAAGGAAGTGAAAAGGGTCCTCGTCAATGGGGAGAATTAAAAGAAGAATGGGCAACTTGCAAAAATGGAAAGATGCAATCTCCCATAGACTTGTCATGTGCCAGAGTCAAAATTATCCCTTACTGTCACCAACTCCACACCGATTACAAATCTTCTAATGCCACTATCATCAATAGAGGCCATGATATTGCCGTATATTGGAAGGGTGATGCTGGCTCAATACGCGTCAATGGAACTGAATTCTTTCTGAAACAATGTCATTGGCACTCTCCTTCTGAACATTCCATCAATGGAAGGAAGTATGACTTAGAGATGCACATGTTGCATGTAAGTCCAGATAACAAGATTTTTGTGGTTGGTGCTTTCTATAAGATTGGTCATCGCCGTGATCGTTTTCTCTATCAGTTGGAGAAAGACATAAAGCACTTAGTTGATGAAGTAGAAGAAAGAGAAATTGGAGAGACAAATCCCTCACATGTACAGACACGAGGCAAAATGTATTACAGATACATTGGCTCACTCACCACTCCTCCTTGCACTGAAGGTGTCATATGGAACATTGATAGAAAGATAAGAACAGTTTCGAAAGAGCAAGTGAGGCTTTTGAGGGAGGCAGTGCATGACCATGCAGAGAGGAATGCAAGGCCAAGACAGGCACGTAACAATCGAGATATAATATACTTTCGATACAAACGCAGAGCAAAGCCAAAATATTAA 840 0.4095 MKLRRDNTYTIPHLFVLLIILLHPASTRAQEVEDEREFDYIEGSEKGPRQWGELKEEWATCKNGKMQSPIDLSCARVKIIPYCHQLHTDYKSSNATIINRGHDIAVYWKGDAGSIRVNGTEFFLKQCHWHSPSEHSINGRKYDLEMHMLHVSPDNKIFVVGAFYKIGHRRDRFLYQLEKDIKHLVDEVEEREIGETNPSHVQTRGKMYYRYIGSLTTPPCTEGVIWNIDRKIRTVSKEQVRLLREAVHDHAERNARPRQARNNRDIIYFRYKRRAKPKY 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g00458 279 SUPERFAMILY Carbonic anhydrase 37 267 IPR036398 -
Cca02g00458 279 SMART Carb_anhydrase_2a 40 270 IPR001148 -
Cca02g00458 279 PANTHER EUKARYOTIC-TYPE CARBONIC ANHYDRASE 2 279 - -
Cca02g00458 279 PANTHER CARBONIC ANHYDRASE 2 279 IPR023561 GO:0004089|GO:0008270
Cca02g00458 279 CDD alpha_CA_prokaryotic_like 47 268 IPR041891 -
Cca02g00458 279 ProSitePatterns Alpha-carbonic anhydrases signature. 133 149 IPR018338 GO:0004089|GO:0008270
Cca02g00458 279 Gene3D Alpha carbonic anhydrase 34 277 IPR036398 -
Cca02g00458 279 Pfam Eukaryotic-type carbonic anhydrase 47 268 IPR001148 -
Cca02g00458 279 ProSiteProfiles Alpha-carbonic anhydrases profile. 36 270 IPR001148 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g00458 Cca-Chr2 9719358 9722279 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g00458 K01674 - gmx:100784540 456.832
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca02g00458 02 9719358 9722279 Cca03g02412 03 45193917 45196852 PCT