Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g01909 ATGGGATCCCAAACACAGTCTCAACTTCACGTTGTTGACTTCACTGATGAAAACATGAAGCCTGGCACTGACACGTGGCTCTCGGTATGCAGTGTTGTGAGGACTGCACTTGAGGACAATGGCTGCTTCGTGGCACGCTATGATCATATTGGCAAAGAGCTTTGTGACTCTGTTGTCTTTGCAATTGAAGAGTTATTCAGTCTTCCCTTGGAAACAAAAGTTCAAAAGATTAGTGACAAACCTTTCTTCGGCTACTTGGGACAAGTCTCAATTGTACCCTTATATGAATCATTGGGAATTGATGACCCCTTGACCTTACAAGGCTGTCAAAAATTCACACACGTAATGTGGCCAGAGGGGAATGATCGTTTCTGTGAAAGAATCAATGAGTATAGTAAGGAGTTGGCAAAATTAGACCATATGGCGAAGAGAATGGTGTTTGAGAGCTATGGTGTGGACATGCAACGATGTAATTCAATGATAGAATCAAGCGATTATCTCCTTCGATGCATGAAATATAGAGCACCTCATATGGATGAAGATCATGCGGGAATGCATTCTCACTCGGACTTGACCATCATATCCGTAGTACATCAGTTGAATAATCTAAATGGCTTGGAAATCAAACTCAAAGATGGGGAATGGCATGGGGTTGATGCCTCACCCTCCTTGTTTGTAGTTATGGCTGGTGATGCATTAAATGTGTGGAGCAATGGGAGGATACAACCATGTGAACACAGAGTTACAATGAATGCAAAGAAAAACAGATACTCTACGGGACTGTTTTCTTTTAGTAGTAAGATGATGAGTATACCGGAGGAGGTAGTTAATGAGCAACATCCCTTGCGTTATAAACCACTCTTCGACCATTATGAATACCTTCGTTTCTATCAAAAACATAAAATCAAAGAGCCTCATTCTCGAATCCAAACATATTGTGGAATCTGA 948 0.4135 MGSQTQSQLHVVDFTDENMKPGTDTWLSVCSVVRTALEDNGCFVARYDHIGKELCDSVVFAIEELFSLPLETKVQKISDKPFFGYLGQVSIVPLYESLGIDDPLTLQGCQKFTHVMWPEGNDRFCERINEYSKELAKLDHMAKRMVFESYGVDMQRCNSMIESSDYLLRCMKYRAPHMDEDHAGMHSHSDLTIISVVHQLNNLNGLEIKLKDGEWHGVDASPSLFVVMAGDALNVWSNGRIQPCEHRVTMNAKKNRYSTGLFSFSSKMMSIPEEVVNEQHPLRYKPLFDHYEYLRFYQKHKIKEPHSRIQTYCGI 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g01909 315 Pfam non-haem dioxygenase in morphine synthesis N-terminal 12 86 IPR026992 -
Cca03g01909 315 Pfam 2OG-Fe(II) oxygenase superfamily 173 263 IPR044861 -
Cca03g01909 315 Gene3D - 7 313 IPR027443 -
Cca03g01909 315 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 163 265 IPR005123 -
Cca03g01909 315 SUPERFAMILY Clavaminate synthase-like 7 302 - -
Cca03g01909 315 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 4 314 - -
Cca03g01909 315 PANTHER 2-OXOGLUTARATE-DEPENDENT DIOXYGENASE 4 314 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g01909 Cca-Chr3 38703745 38705777 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca03g01909 130 285 Glycosyltransferase AT5G59530 29.630 1.40e-11 62.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g01909 - - gmx:100775440 546.584
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g01909 03 38703745 38705777 Cca02g00381 02 7988367 7991006 PCT
Cca02g00349 02 7232937 7236125 Cca03g01909 03 38703745 38705777 PCT