Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g00349 ATGGGTTCAGAAGGACAGCCCATGCTTCCTGTTCTAGATTTCACCATGGAAGATTTGAAGCCAGGGACCAATTCCTGGTTAACAACATGCAGAAGGGTGCGCCAAGCATTTGAAGAATATGGTTGCTTCGTAGCTGTGTATGATAAAGCTTCTGTTGGGCTTCAAAATGGTGTGTTCGGTTCAATGAAGGAGCTCTTCGATCTCCCAGCTGAAACCAAACAAAGAAACATATATGAGGGCATGCCTTTGAAAGGCTATGTTGGTCAACGCCCACAGATTCCTCTTCACGAAAGTATGGGTATAGATGAGGGAACAACACTAGAGGGGATTCAAAATTTCATACAAAAAATGTGGCCAAACGGAAATGATCAATTCTGCAAATATATATTTGAGTATGCAAAGCTAGCTGAAGACTTGGATCGGATGGTGGCCAGAATGATATTTGAAAGTTATGGTGTTTTGAAACACTATGACACATACATAGGGTCAACAAGTTATCTCCTTAGGCTTTTGGCACACAAAGCACCAGAACAAGTCGAGCAACAACTAGGTTTCGTTGCTCACACTGACAAGAGCTTCACAACAATTCTTCACCAGAATCAAGTCAATGGACTCATGGTGGAGACAAGGGATGGTCACTGGATTGATGTTGATTTCTCTTCACCTACTTCCTTTGTCGTCATGGCTGGCGATGCACTCATGGCTTGGAGCAACGACAGAATAAAGTCCCCTAATCATAAGGTTTTGATGAAAGGGAACGAAATAAGGTACTCTCTTGGTCTGTTTGCCTTCTACAAAGGGATTATGCAAGTACCTGAAGAGCTAATTGATGAGGAACACCCATTGCAATATAAGCCCTTTGATCATCTTGGTTTGTTGAACTTCACTTACAGTGCTAATATGAAAGCCTATTGTGGCGTCTAA 924 0.4232 MGSEGQPMLPVLDFTMEDLKPGTNSWLTTCRRVRQAFEEYGCFVAVYDKASVGLQNGVFGSMKELFDLPAETKQRNIYEGMPLKGYVGQRPQIPLHESMGIDEGTTLEGIQNFIQKMWPNGNDQFCKYIFEYAKLAEDLDRMVARMIFESYGVLKHYDTYIGSTSYLLRLLAHKAPEQVEQQLGFVAHTDKSFTTILHQNQVNGLMVETRDGHWIDVDFSSPTSFVVMAGDALMAWSNDRIKSPNHKVLMKGNEIRYSLGLFAFYKGIMQVPEELIDEEHPLQYKPFDHLGLLNFTYSANMKAYCGV 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g00349 307 SUPERFAMILY Clavaminate synthase-like 9 301 - -
Cca02g00349 307 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 164 265 IPR005123 -
Cca02g00349 307 Pfam non-haem dioxygenase in morphine synthesis N-terminal 9 88 IPR026992 -
Cca02g00349 307 Pfam 2OG-Fe(II) oxygenase superfamily 171 262 IPR044861 -
Cca02g00349 307 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN 3 306 - -
Cca02g00349 307 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 3 306 - -
Cca02g00349 307 Gene3D - 8 305 IPR027443 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g00349 Cca-Chr2 7232937 7236125 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca02g00349 129 285 Glycosyltransferase AT5G59530 29.268 1.40e-11 62.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g00349 - - gmx:100809268 551.206
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca02g00349 02 7232937 7236125 Cca03g01909 03 38703745 38705777 PCT