Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g02299 ATGCATTCCCTTGGTCAAAATGATGCCTCCCTAGCATGCCCTCAAGGGTGCTGCCCTACTTCACTATCGTTCAATCCCCCACCACCACAATCTCAGAATACAACAACCAAACCCAGAAACAGTTCTGCAGAGTGTCGCCACAGCTTTGCAGCCACCACAGCATCCTCTATCTTCCCAAACACCAAATTCACCAACCATGAGTCCCTTCCATCTCTTCATGAATCATTCAGTGAATTCAAGAAAGTATACCCTCAATACGCAGAAACTGACCAAGTGGACCATGTGAGAGCCAAAGAATATTACCACCTCTCTTTCTCCAACCAATCATGCCTTGACTACATCGGTATTGGACTCTTCTCCTATTACCAACGCCAACACCATCACCACACCTCAAAATCCCAACTTGCCTCTTCTTCAACAACTCAATCCCCACCCCAATATTCTGATATTCCCTTCTTTAGTATATCCTACAAGACTGGGAATCTAAAGACACTTTTGCAACATGGGGGGCAGGGGTCAGAGTTTGAGTCTGCAATGAAGAGAAGAATTATGAAGTTCCTCAACATTTCGGAAAATGACTACTTCATGGTTTTCACAGCAAACAGAACATCAGCTTTCAAACTTGTGGCAGACTCGTACCCCTTTCAATCTTGCAAGAAGCTTCTGACAGTTTATGATTATGAGAGTGAGGCAGTGGAAGCAATGATTAGCTGCTCAGAGAAGAGAGGAGCCAGGGCCATGTCAGCAGAGTTCTCATGGCCAAGGCTTAGGATTCAGTCAACAAAACTGAGGAAGATGATTGTTAGCaagaggaagaagaagaagaagaGGGGTCTCTTTGTGTTCCCTCTTCACTCCAGGGTAACAGGAGCAAGATATCCTTACCTGTGGATGAGCATAGCACAGGAGAATGGGTGGCATGTGTTGATTGATGCTTGTGCATTGGGACCCAAAGACATGGACAGCTTTGGCCTCTCTCTCTTTCAACCTGACTTCCTCATTTGTTCCTTCTACAAGGTTTTTGGAGAAAACCCATCAGGGTTTGGATGCCTTTTTGTCAAGAAATCTGCTATCACCACTCTTGAATCCTCATCTTGTGCAGGGATTGTGAACCTTGTGCCAGATAGGTTGCTACTTCAGCCATCAGAGGATAAGGATTCTTCTGGAAACTGCAAGCAAAAACCGTTATCTAGCTTACAAGAACAAGATTTATCTTCCTTGAGTTCTTTCTCTGGCCGGATAGAAACCACACAAGTTGCGAAAGTTGCGGAAGAATCATCTGAGCTTCAGATCATAGTGGCACCCGCAGAAACAAAAGAAGGTTCTGGAACTGTGGAAGCAAAAGGACTAGTTGAGAGCATTCAACAGAAGAAAGCACAAGGTGGTGAGAATGGGGGATTTAACATTGAGTGCAGGTGTTTGGATCACGTGGACTCTTTGGGATTGATACTGATGACCAATAGAACAAGGTACCTGATAAATTGGTTGGTGAACTCCTTGATGAAGCTGAAGCACCCTAATGCAGAAGGGGTTCCCCTAGTCAAGATTTATGGGCCAAAGGTGAAATTTGATAGGGGACCTGCTTTGGCATTCAATGTGTTTGATTGGAAAGGTGAAAAGGTTGAGCCTGTCCTTGTACAGAAGCTTGCTGATAGAAACAATATATCTCTCAGCTATGGATTTCTACATCATATTTGGTTTGCAGATAAGTATGCAGAAGACAAGGGAAAAGTTCTACAGACCAAAGAAGGAAGAGGCCAGGGAGTAACTACCAACAAGAAGAATGATAGGGATAAGCTAGGAGTAACTGTGGTTACTGCTGCATTAAGCTTCCTGGCTAATTTTGAAGATGTATATAAACTTTGGACTTTTGTTGCCAGGTTCCTTGATGCTGATTTTGTGGAGAAGGAGAGATGGAGATACACAGCTCTCAATCAGAAAACAATTGAAGTTTAA 1956 0.4335 MHSLGQNDASLACPQGCCPTSLSFNPPPPQSQNTTTKPRNSSAECRHSFAATTASSIFPNTKFTNHESLPSLHESFSEFKKVYPQYAETDQVDHVRAKEYYHLSFSNQSCLDYIGIGLFSYYQRQHHHHTSKSQLASSSTTQSPPQYSDIPFFSISYKTGNLKTLLQHGGQGSEFESAMKRRIMKFLNISENDYFMVFTANRTSAFKLVADSYPFQSCKKLLTVYDYESEAVEAMISCSEKRGARAMSAEFSWPRLRIQSTKLRKMIVSKRKKKKKRGLFVFPLHSRVTGARYPYLWMSIAQENGWHVLIDACALGPKDMDSFGLSLFQPDFLICSFYKVFGENPSGFGCLFVKKSAITTLESSSCAGIVNLVPDRLLLQPSEDKDSSGNCKQKPLSSLQEQDLSSLSSFSGRIETTQVAKVAEESSELQIIVAPAETKEGSGTVEAKGLVESIQQKKAQGGENGGFNIECRCLDHVDSLGLILMTNRTRYLINWLVNSLMKLKHPNAEGVPLVKIYGPKVKFDRGPALAFNVFDWKGEKVEPVLVQKLADRNNISLSYGFLHHIWFADKYAEDKGKVLQTKEGRGQGVTTNKKNDRDKLGVTVVTAALSFLANFEDVYKLWTFVARFLDADFVEKERWRYTALNQKTIEV 651
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g02299 651 Pfam Aminotransferase class-V 163 368 IPR000192 -
Cca02g02299 651 Gene3D - 160 384 IPR015421 GO:0003824
Cca02g02299 651 MobiDBLite consensus disorder prediction 382 404 - -
Cca02g02299 651 PANTHER MOLYBDOPTERIN COFACTOR SULFURASE MOSC 3 651 - -
Cca02g02299 651 SUPERFAMILY PLP-dependent transferases 128 368 IPR015424 -
Cca02g02299 651 PANTHER MOLYBDENUM COFACTOR SULFURASE 3 651 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g02299 Cca-Chr2 43656860 43659449 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g02299 - - gmx:100820534 1155.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca02g02299 02 43656860 43659449 Cca06g01761 06 32896337 32898067 ECH
Cca02g02299 02 43656860 43659449 Cca02g02299 02 43656860 43659449 ECH
Cca08g00565 08 9438687 9440591 Cca02g02299 02 43656860 43659449 PCT