Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca06g01761 aTGCAGCCACCTTGTGCAGGAGAAGCATCACAACCCTGCTACAACGCCTGTTTCCCTTCTTCTTCTATGCTTTCCTCTTACACTCAAAAGTTTCCCAATTCTAGCCATGATGACTTTGAGGCAGCCACATCTTCCACTCTTCCTCCACACACCCAATTCACCAACCATGAGGCCCTCCCCTCTTTGGACGACTCATACATCAACTTCACCAAATCATACCCTTCATTTGCCAATACATCTCAACTTGATCGAATCCGTGCCCAAGAATATCATCACTTGAACCCCTTCAACATTTGTTTTGACTACACTGGTTATGGCCTTTTCTCCCACGCTCAGGACCAAtcatcttcatatgcttcttcatcttctcgtcctcCCCCTCCTCCACCACCCTTCTTTCTCATCTCTTACAAGTCAGTAACCTTGCACTCTCAGATACTCTATGGAGGCCAAGAATCCGAACTAGAATCCAAAATCAGAGGAAGAATCATGGCGTTTACGAACATCTCTGAAGATGACTACACTCTTGTTTTCATTGCCAACGATGTATCTGCCTTTAAACTTGTAGCAGATTCTTTTCAGTTTCAGCCTCATGGAGAGCTTCTCACAGTGTATGACCACAAGAGTGAGGCAGTGGATACGATGATTGAGACCTGCAAGGAGCAAGGAGTCCATGTCATGTCAGCTAAGTTCACCTGGCCAAGTCTCAGTATCATGGGAAGAAAACTGAAGAAGATGGTAATGTGTAAAAGGGGGAAGAGAAAGAAAGGGCTATTTGTTTTTCCTCTTCATTCAGGTGTTACTGGGACACCCTATTCGTATATTTGGATGTCCTTGGCACAAAAATTTGGTTGGCATGTCTTGCTTGATGCACGTGCATTGGGTCCTAAGGAGATGGACACCTTGGGTTTGACTATGTTTAAGCCTGATTTTATAGTGTGTTCATTATACAAAGTTTTCGGTCAAAACCCATCCGGTTTTGGGTGCTTGTTCATCAAGAAATCTAGTATCTCTGCTCTAAGAGAATCAGGCAATGCTACAAGCATGGGAATTGTAGGCCTCTCTCCAGCATTTAGATCAGTGTCACCACATGGAACTGAACAAGTGTTGTCATCATCAGAAATTGTGGAGTTAAGCACATGCACATCCCTTGAGTCGGGTCAATCTAGAGAAAGATTAGGCGCAGGCTTAGAAATTGAGTGTAGAGGATTGGACCATGCTGACTCGGTGGGGCTAGTAGTAATTAGTTGTAGGGGTAAGTATCTTATCAATTGGCTTGTTAATGCATTAATAAGACTTGAACATCCACATCCTCCAACTGGGCATGCTCTAATTAGGATATATGGACCAAAGATAAGTGCACAGCGTGGACATGTTGTGGCATTTAATGTGTTTGATTGGAAAGGAGAAAAGGTGGATCCTGCAATTGTACAGAAACTAGCAGGTCGTAACAATATCTCTTTAAGTAACGCATTTTTGCAAAACATATGGTTCTCGGAGAGGAGTGATGAAGAGGGACAAAGGGCTTTGGAAAACAGAGATAAAGTATCTAACAAGACACGAAAGAGTGGTTTTGGGATAACTGTTGTGACAGCTGCACTTGGTTTGTTCACAAACTTTGAAGATGTATACAGGCTGTGGGCTTTTCTTTCCAGGTTCTTGGATGCTGACTTTGTGGACAAAGAGACATGGAGATACATGGCTATAAATCAAAAAACCATTCATATATGA 1731 0.4211 MQPPCAGEASQPCYNACFPSSSMLSSYTQKFPNSSHDDFEAATSSTLPPHTQFTNHEALPSLDDSYINFTKSYPSFANTSQLDRIRAQEYHHLNPFNICFDYTGYGLFSHAQDQSSSYASSSSRPPPPPPPFFLISYKSVTLHSQILYGGQESELESKIRGRIMAFTNISEDDYTLVFIANDVSAFKLVADSFQFQPHGELLTVYDHKSEAVDTMIETCKEQGVHVMSAKFTWPSLSIMGRKLKKMVMCKRGKRKKGLFVFPLHSGVTGTPYSYIWMSLAQKFGWHVLLDARALGPKEMDTLGLTMFKPDFIVCSLYKVFGQNPSGFGCLFIKKSSISALRESGNATSMGIVGLSPAFRSVSPHGTEQVLSSSEIVELSTCTSLESGQSRERLGAGLEIECRGLDHADSVGLVVISCRGKYLINWLVNALIRLEHPHPPTGHALIRIYGPKISAQRGHVVAFNVFDWKGEKVDPAIVQKLAGRNNISLSNAFLQNIWFSERSDEEGQRALENRDKVSNKTRKSGFGITVVTAALGLFTNFEDVYRLWAFLSRFLDADFVDKETWRYMAINQKTIHI 576
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca06g01761 576 Gene3D - 138 362 IPR015421 GO:0003824
Cca06g01761 576 SUPERFAMILY PLP-dependent transferases 145 555 IPR015424 -
Cca06g01761 576 PANTHER MOLYBDENUM COFACTOR SULFURASE-LIKE PROTEIN 3 576 - -
Cca06g01761 576 Gene3D Aspartate Aminotransferase, domain 1 402 552 IPR015422 GO:0003824
Cca06g01761 576 PANTHER MOLYBDOPTERIN COFACTOR SULFURASE MOSC 3 576 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca06g01761 Cca-Chr6 32896337 32898067 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca06g01761 - - gmx:100809950 890.952
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca06g01761 06 32896337 32898067 Cca06g01761 06 32896337 32898067 ECH
Cca02g02299 02 43656860 43659449 Cca06g01761 06 32896337 32898067 ECH