Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca08g00565 ATGCAGACCCTTCATGAGGCCTCTCACACATGCCCTCAATGTTGTTGTTGCAACTGCACAACCCCATTTTTCAACTCACCAACACCACACACCAAAACACCACCAAAGCACAGAAACAGTTCTGCTGAGTGGAGACACAGCTTTGCAATCACAACATCATCATCTATATTCCCAAACACTCAATTCACCAACCATGAGTCTCTTCCATCACTCCATGAATCATTCAATGAGTTCACCAAAGTGTACCCTCAGTATTATGAGACTGAACAAGTGGACCATGTTAGAGCCAAAGACTATTCCCACCTCTCACTTTCAAACCAAACTTGCCTTGATTACATTGGCATTGGCCTCTTCTCCTACTCCCAACTTCAACACCATGACACATCTAAAAACCAACTAGCCTCATCTTCATTTCCTCAAGCACCACCTAATTACTCAGACTTTCCCTTCTTTAGCATATCCTGCAAGACTGGGAGCCTAAAGACTTTGTTGCTTCATGGGGGGCAAGACTCAGAATATGAGGCTGCAATGAGGAAGAGAATCATGTGTTTCCTTAACATATCTGAAAATGATTACTTCATGGTTTTCACAGCCAACAGAACCTCAGCTTTCAAGCTTGTGGCTGACTCATACCAGTTCCAAACCAGTAGGAGGCTTTTGACAGTTTATGACTATGAAAGCGAGGCGGTGGCAGCGATGATTGATTCCTCGGAGAAGAGAGGAGCAAGAACCATGTCAGCTGAGTTCTCATGGCCAAGGTTGAGGCTTCAGACAGCAAAGTTGAGGAAGATGATTGAGAGCAAGAGAAAGAAGAAAAAGAGAAAAGGACTTTTTGTTTTGCCACTTAGTTCAAGAGTAACAGGAGCAAGATATCCTTATCTGTGGATGAGAATAGCACAGGAGAATGGATGGCATGTGTTGGTTGATGCATGTGCATTGGGGCCTAAAGACATGGACTGTTTTGGCCTTTCTCTCTTTCAACCAGATTTTCTCATTTGCTCTTTCTATAAGGTATTTGGGGAAAACCCTTCTGGATTTGGATGCCTTTTCATCAAGAAATCTGCCATTTCCACCTTGGAATCTTCCCCTTCTGCAGGAATTGTCAACCTTGTACCAGAAAAGCAGCCTCGTCATCAAGTATCAGATGATTCTTCTGGCACTGACAAAGAACTTAAACACAAACCAATACCAACAAGCCTACATGAAGAGAAACCATTTCCCTTGCCATCTTTCTCAGGTCCAATACAAACCAAACAATCTGAAACAGTTGAACAAAGAGAACCACACCCAAAAGCTCCTCCGGGTTCTGAGATTGAGGAGGTACAAGAGCCAATTAAGACCCTTGAGAAAAGTAATGTCCAAGAAAGTGACATTCAATGTAGTTGCTTAGACCAAGTGGATTCTCTAGGATTGATTCTCATCACTAACCGGTCAAGGTACCTGATAAACTGGCTGGTGAACTCAATGTTGAAGCTTAAGCATCCCAACACACAAGGGGTTCCTTTGGTAAAGATTTATGGTCCAAGGGTGAAGTTTGATAGAGGGCCTGCTTTGGCATTCAACATATTTGATTGGAAAGATAAGTATGCAGAAGAGAAGGGGAGAATCCTACAAACCAAAGGAGTTGTGGCAACCAACAAGAAGAAAGACACTGTTGGAATCACTGTGGTTACTGCTGCATTAGGCTTCCTGGCTAATTTTCAAGATGTCTATAAGCTTTGGGCCTTTGTTGCTAGATTCCTTGATGCTGACTTTGTGGAGAAAGAGAGGTGGAGATATATTGCCATCAATCAGAAAACAGTTGAAGTTTAG 1812 0.4283 MQTLHEASHTCPQCCCCNCTTPFFNSPTPHTKTPPKHRNSSAEWRHSFAITTSSSIFPNTQFTNHESLPSLHESFNEFTKVYPQYYETEQVDHVRAKDYSHLSLSNQTCLDYIGIGLFSYSQLQHHDTSKNQLASSSFPQAPPNYSDFPFFSISCKTGSLKTLLLHGGQDSEYEAAMRKRIMCFLNISENDYFMVFTANRTSAFKLVADSYQFQTSRRLLTVYDYESEAVAAMIDSSEKRGARTMSAEFSWPRLRLQTAKLRKMIESKRKKKKRKGLFVLPLSSRVTGARYPYLWMRIAQENGWHVLVDACALGPKDMDCFGLSLFQPDFLICSFYKVFGENPSGFGCLFIKKSAISTLESSPSAGIVNLVPEKQPRHQVSDDSSGTDKELKHKPIPTSLHEEKPFPLPSFSGPIQTKQSETVEQREPHPKAPPGSEIEEVQEPIKTLEKSNVQESDIQCSCLDQVDSLGLILITNRSRYLINWLVNSMLKLKHPNTQGVPLVKIYGPRVKFDRGPALAFNIFDWKDKYAEEKGRILQTKGVVATNKKKDTVGITVVTAALGFLANFQDVYKLWAFVARFLDADFVEKERWRYIAINQKTVEV 603
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca08g00565 603 PANTHER MOLYBDENUM COFACTOR SULFURASE 527 603 - -
Cca08g00565 603 PANTHER MOLYBDENUM COFACTOR SULFURASE 8 526 - -
Cca08g00565 603 PANTHER MOLYBDOPTERIN COFACTOR SULFURASE MOSC 8 526 - -
Cca08g00565 603 PANTHER MOLYBDOPTERIN COFACTOR SULFURASE MOSC 527 603 - -
Cca08g00565 603 SUPERFAMILY PLP-dependent transferases 172 365 IPR015424 -
Cca08g00565 603 Pfam Aminotransferase class-V 176 364 IPR000192 -
Cca08g00565 603 Gene3D - 165 372 IPR015421 GO:0003824
Cca08g00565 603 MobiDBLite consensus disorder prediction 422 440 - -
Cca08g00565 603 MobiDBLite consensus disorder prediction 368 440 - -
Cca08g00565 603 MobiDBLite consensus disorder prediction 376 400 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca08g00565 Cca-Chr8 9438687 9440591 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca08g00565 - - gmx:100790494 997.653
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca08g00565 08 9438687 9440591 Cca02g02299 02 43656860 43659449 PCT