Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g02265 ATGTTCAAGTCATGGAGCAAGAAGAACAAGATCAAAGCTGTGTTCAAACTGGATTTTCAGGCAACTCAGGTGCCAAAGATGAAAAAGTCTGCAATAATGGTGTCTTTGGTGCCAGATGATGTTGGGAAGACAACAGTGAAACTTGAGAAAACTGCTGTCCAAGATGGGACCTGCTCATGGGAGAATCCAGTTTTTGAGCCAGTTAAACTTGTTAGGGATGCAAAGTCAGGAAAAATTCATGAGAAAATCTACCATTTCATTGTTTCAACTGGATCTTCAAAATCTGGCTTTCTTGGAGAAGCCTCAATTGATTTTGCTGATTTTGTTGCAGAGACTGAGCCATTGACTATTTCTCTTCCCCTAAAGTTTGCCAATTCAGGCATAGTTTTACATGTGACTATTCAAAACGTGGAAGGATATACTGCTGAAAGCAATGGGGAATATAATGGAGCTGAGGGGCTTTGCAGTGACGGAAGCTTGAAACACCAGCTGAGCTATGGCAGTACAGATCATGAAAGTTATAATGTTGATGAAAATGGGCACATGGCGAGGACCAGATCCGAGTATTCTGAGCAAGATGCATCTAATGGCATTAGTCCCGGGGTAGCTTCATGGGAGGATCCTTATAGCTTCAGACAAAATTCAATGCCATCAAAAAGAACTGTTAAGGAGGCCATTGCAACAGAAAACCAAGTGCATGAGAGGTCAAACACAAACTGGTCAATTGGTTCAGCATCAGATGGAAGTTTAGGTGACTGGACTAACAGCCTGGAAGACAATCTCCCTAGAGAAAGATTACATGAGCCTTCAGATAATGCCACTGAAAAGCTCAAAAGTGAAATTTCTTCCTTAAAGAGGCAGGCAGAAGTATCAGAAATAGAGTTACAATCACTACGAAAACAGATAGAAAAAGAAAGCAGCAGGGGACAGAATTTGTCAAGACAAATAATCAGCCTCAGAGAGGAGAGAGATTTGCTTAAAACCAAATATGAGCAACTAAAGTCCCAGCAGAACTTCAATAGTGAGAGTAAAACCCCTAAAATCTTCAAGTCTGAGATTGAAGATACTAAGCTTCAGTTAGAGGCAATAAAGGAAGAGCTTGTTTATGAAAAAGAATTGAATGCCAATCTTCAATTGCAAATGCGGAAGACACAAGACTCAAATTCTGAATTACTTTTGGCTGTGACAGACCTTGAAGCAATGCTGGAACAAAAGAATAAGGAAATATTGGATCTATCTACCAATAAAAAATCCCAAAGGACTTCTAAACAGTACGATGATGCCACAGAATTAGATCTCTTGCGGCAAAAAATTGCAGACCAGAATGATGAAATAGACAATTGCTATAAGCAACGTGAGGAACTAAGTGAGCAAATAAAAGATCTCACTTCAGAGTATGATCTTCTTAAGAAGGAAAATGTAGAAATCTCTTTGAGGTTAAAGCAAGATGAAGCACAACACATCATGTTACAAAGTGAACATTCATCTTCTTTAGTTACAATACAACAACTTGAATCCCAAGTAGAGAGATTAGAAGAAAAGCTAAAGGCGCAGGAAGATGAATTTTCAGCATCCCTGGTCTGCATCAAAGAACTTGAAAATGAAGTCAAGTCTTTGGAGAAAGAACTGAAAATGCAGGCAGATAAGTTTGAAGAAGATCTCCATGCTATGCAATGTGCAAAAACTGAGCAGGAAGAACGGGCAATCCAAGCAGAAGAGGCCTTGAGAAAGACAAGACATAATAATGCTGTTGCATCTGAGCGTTTTGAGGAGGAATACAGATTGCTTTCTGTTGAAATGTCTCAAAAAGTTGAGGAGAATGAAAAGATGACTATGAAAGCAGTAGGAGAAGCTGATGAATTGCGGCACCAGAACAAGCTAATAGAAGAAATGCTTCATAAATGCAATCAAGAGCTCAGGCTTATCACAGAACAGAATGATTTGAAAATGCAAGAGCTTTTGGATCAAATAGATTCAAAATCAAAAACAATAAAACAGATGTCACAAGAACTAGAAGTTAAGTCTAAACAACTTGAGGATGCAGAAAGGCACAGGGAAGAAAAGGATGCTTCATTTTCAAAGCAAATACAAATGCTCAGATCTCAAATTAAAATGTTGATGGAAGAGGATGCATTTGAAACCAAGCTAACAAAGAACTTGGCTGACATGGCAAGGGAAGATGCAAAAATAGCCCATAAAGGAAGACCACTTATGATGCCAAATGATGAGATGATACTGGGCACCCTACTGTCTGAGGTAGAAACATTTAAGAACCAGCATAATGAAATAAAACACAGTTTGCATAAAGAAAAAGTGGAGAAAGAAAATATGAAGAAACATATATCTCAATTAGAAGGAGAGCTGAAGAAGAAGGAAACAGAGTTAAATGCTATGGAAAAGAAGCTCAAGAATAACAAAGGACGAGCTGCAGTTACAAATATGAATTTGGCATCAAAAGACAATGAGTGTGCTGAGCCTCCTACCGCTAAGGCACATGTCCAGAAGGCAAAATCCGTAAGGCATAAGGGAACGGATGCTGCAAGTGCTGCTGTTAGTAAGTCTGAAGCAGGAAAAATAGGCAAGTCAACTGAGAACAAAGTTTGTCTGGCTCCTGGAAGTGAGGATACAAATGAATTGTTGAATGAAGTTGCACTGCTAAAGGAAAGGAACAAGACTATGGAAAGTGAGCTGAAAGACATGGAAGAAAGATATTCAGAGATTAGTTTGAAATTTGCAGAGGTAGAGGGAGAAAGACAACAGCTTGTTATGGCTCTACGCAATCTCAAGAATGGTAAGAAGAATTAG 2805 0.3897 MFKSWSKKNKIKAVFKLDFQATQVPKMKKSAIMVSLVPDDVGKTTVKLEKTAVQDGTCSWENPVFEPVKLVRDAKSGKIHEKIYHFIVSTGSSKSGFLGEASIDFADFVAETEPLTISLPLKFANSGIVLHVTIQNVEGYTAESNGEYNGAEGLCSDGSLKHQLSYGSTDHESYNVDENGHMARTRSEYSEQDASNGISPGVASWEDPYSFRQNSMPSKRTVKEAIATENQVHERSNTNWSIGSASDGSLGDWTNSLEDNLPRERLHEPSDNATEKLKSEISSLKRQAEVSEIELQSLRKQIEKESSRGQNLSRQIISLREERDLLKTKYEQLKSQQNFNSESKTPKIFKSEIEDTKLQLEAIKEELVYEKELNANLQLQMRKTQDSNSELLLAVTDLEAMLEQKNKEILDLSTNKKSQRTSKQYDDATELDLLRQKIADQNDEIDNCYKQREELSEQIKDLTSEYDLLKKENVEISLRLKQDEAQHIMLQSEHSSSLVTIQQLESQVERLEEKLKAQEDEFSASLVCIKELENEVKSLEKELKMQADKFEEDLHAMQCAKTEQEERAIQAEEALRKTRHNNAVASERFEEEYRLLSVEMSQKVEENEKMTMKAVGEADELRHQNKLIEEMLHKCNQELRLITEQNDLKMQELLDQIDSKSKTIKQMSQELEVKSKQLEDAERHREEKDASFSKQIQMLRSQIKMLMEEDAFETKLTKNLADMAREDAKIAHKGRPLMMPNDEMILGTLLSEVETFKNQHNEIKHSLHKEKVEKENMKKHISQLEGELKKKETELNAMEKKLKNNKGRAAVTNMNLASKDNECAEPPTAKAHVQKAKSVRHKGTDAASAAVSKSEAGKIGKSTENKVCLAPGSEDTNELLNEVALLKERNKTMESELKDMEERYSEISLKFAEVEGERQQLVMALRNLKNGKKN 934
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g02265 934 Coils Coil 767 808 - -
Cca02g02265 934 Coils Coil 274 336 - -
Cca02g02265 934 Coils Coil 876 917 - -
Cca02g02265 934 MobiDBLite consensus disorder prediction 832 858 - -
Cca02g02265 934 PANTHER MYOSIN HEAVY CHAIN-RELATED PROTEIN 1 934 - -
Cca02g02265 934 MobiDBLite consensus disorder prediction 185 218 - -
Cca02g02265 934 MobiDBLite consensus disorder prediction 238 257 - -
Cca02g02265 934 ProSiteProfiles C2 NT-type domain profile. 3 138 IPR019448 -
Cca02g02265 934 PANTHER BNAC08G20130D PROTEIN 1 934 - -
Cca02g02265 934 Coils Coil 650 684 - -
Cca02g02265 934 Coils Coil 431 479 - -
Cca02g02265 934 Coils Coil 529 581 - -
Cca02g02265 934 Coils Coil 618 638 - -
Cca02g02265 934 MobiDBLite consensus disorder prediction 238 256 - -
Cca02g02265 934 Coils Coil 388 415 - -
Cca02g02265 934 Pfam N-terminal C2 in EEIG1 and EHBP1 proteins 7 135 IPR019448 -
Cca02g02265 934 Coils Coil 494 521 - -
Cca02g02265 934 Coils Coil 360 380 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g02265 Cca-Chr2 43185663 43191150 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g02265 - - gmx:100806603 1489.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca02g02265 02 43185663 43191150 Cca06g01786 06 33182005 33186857 ECH
Cca02g02265 02 43185663 43191150 Cca02g02265 02 43185663 43191150 ECH
Cca08g00642 08 11615591 11621019 Cca02g02265 02 43185663 43191150 PCT