Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g00743 ATGAAGGTTTCAGTCTCGGGAAAGCTCTTCACAGTGGGGTTGATAAGTTTCTGGTACGCCTCCAACATTGGGGTGTTGCTGTTGAACAAGTACCTCCTGAGCAATCACGGTTTCAGGTACCCTATATTCTTAACGCTGTGCCACATGATGGCGTGTTCCATTCTCAGCTACGTGGCCATTGCATGGCTGAAGATGGTTCCCATGCAAACGGTGCGGTCGAGGGTGCAGTTTCTGAAGATATCGTCACTGGGACTCATATTCTGCTTGTCCGTTGTGGGAGGCAACATCTCCCTCCGCTACCTCCCCGTGTCCTTCAACCAGGCCGTCGGCGCCACCACGCCGTTCTTCACGGCGGTGTTCGCTTATTTCATGACGCTAAAGAGGGAGGGCTTGCTCACGTATGCCACACTCGTCCCGGTTGTTTCTGGCGTTGTTATTGCTAGTGGGGGAGAACCAAGCTTTCATCTATTTGGATTCATAATGTGCATCAGTGCTACAGCAGCCAGGGCACTCAAAACAGTGCTTCAAGGGGTCTTGCTGTCTTCTGAAGGGGATAAGCTCAATTCTATGAACCTTCTTATGTACATGGCACCAGTAGCTGTTGCATTCCTTCTTCCAGCTTCAATCATAATGGAGGAAGATGTAGTCGGCATCACAATTTCACTTGCTAGAGAGGATTCAAGTATTTTGTGGTTACTTCTCTTCAATTCTGCATTGGCATATTTTGTCAATTTGACAAATTTCTTAGTCACAAAGCACACCAGTGCATTGACACTTCAGGTCCTGGGAAATGCAAAGGGAGCTGTGGCTGTTGTTATCTCCATTTTGATATTTCGAAATCCTGTATCAGTGACTGGAATGTTTGGATATTCTCTCACAGTCATTGGAGTCATCCTATATAGTGAAGCCAAAAAACGGGGTAAATAA 927 0.4693 MKVSVSGKLFTVGLISFWYASNIGVLLLNKYLLSNHGFRYPIFLTLCHMMACSILSYVAIAWLKMVPMQTVRSRVQFLKISSLGLIFCLSVVGGNISLRYLPVSFNQAVGATTPFFTAVFAYFMTLKREGLLTYATLVPVVSGVVIASGGEPSFHLFGFIMCISATAARALKTVLQGVLLSSEGDKLNSMNLLMYMAPVAVAFLLPASIIMEEDVVGITISLAREDSSILWLLLFNSALAYFVNLTNFLVTKHTSALTLQVLGNAKGAVAVVISILIFRNPVSVTGMFGYSLTVIGVILYSEAKKRGK 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g00743 308 Pfam Triose-phosphate Transporter family 14 301 IPR004853 -
Cca01g00743 308 PANTHER - 2 306 - -
Cca01g00743 308 PANTHER SOLUTE CARRIER FAMILY 35 2 306 - -
Cca01g00743 308 SUPERFAMILY Multidrug resistance efflux transporter EmrE 50 150 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca01g00743 Cca-Chr1 9782081 9785184 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca01g00743 1 308 Organic Solute Cotransporters AT3G11320 82.143 0.0 530
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g00743 - - gmx:100803533 576.244
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca01g00743 01 9782081 9785184 Cca01g00743 01 9782081 9785184 ECH
Cca01g00743 01 9782081 9785184 Cca05g01560 05 34799037 34802972 ECH
Cca01g00743 01 9782081 9785184 Cca01g01804 01 42150319 42153888 ECH
Cca01g01804 01 42150319 42153888 Cca01g00743 01 9782081 9785184 ECH