Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g01471 ATGTCTTCTAAACAGAAACAGACTTACAGCGTTTGCTTTTGCTGCCGGCGACGGTTTAAACTCGGCGTATCGGAGGCACCGCCGGAGATAAGGGAATTTTTTCACCGTTACTGCGATGAAAACGGGATCATGACTGCATCTCACCTGCGAAGGTTTCTGACTGAGGTCCAGAGAGAAGAGAAGATCACAGAGGAAGAAACACAAGCCATCATCGACGGTCACAAACATTTGAGTATCTTTCATCGAAGGGGTCTAAATCTCGAAAGTTTCTTCAAGTTTCTATTCAGTGATGATAATCCTCCTCTCTTACCTTCTCGTGGGGTGCACCAAGATATGACTTTGCCATTGTCTCATTATTACATATACACTGGTCATAATTCCTATCTAACTGGAAATCAGCTTAGTAGTGACTGCAGTGATGCCCCCATCATCAATGCACTGCAGAGAGGTGTAAGGGTTATCGAATTAGATATATGGCCTAATGATTCCAAGGAGGATATTCATGTTCTTCATGGAAGGACATTGACTACTCCCGTCGCGCTTATCAAATGTTTGAGGTCTATTAAGGAGTACGCCTTTGTCGCGTCAGAATACCCGGTTGTAATAACCTTAGAAGACCATCTTACTCCTGATCTTCAGGCCAAAGTGGCTAAGATGGTTACTCAAACATTTGGAGACATACTATTTTGTCCTAGCTCAGAATCATTGAAGGAATTTCCTTCTCCTGAATCACTTAAAAAGAGGATTATCATATCAACTAAACCACCTAAGGAGTACCTTGAGGCAAAAGAAGGAAAGGAAAAGGGAGAATCACAGAGGGGAAAGCCTTCAGATGATGAAGAAGCTTGGGGCAAAGAAGTCCCCAGTTTGAGAGGCGGTACCATAGCAGATTACAAGCAGAACAGTGGGgatgatgaagatgatcttactgaagaggatgatgatctagatgaAGCAGAAAAGTTGGGTCAAAATGGATCGGATGAATATAGACGTTTAATTGCCATTCATGCTGGGAAGCCTAAAGGTGGACTAGAGGAAGGTCTCAAAGTGGATCCTGATAAAGTGAGACGTCTAAGTTTAAGTGAGTCACAGCTCGAAAAGGCGGCTGAAACATATGGAAAAGAAATTGTCAGGTTTACTCAGCGGAATATACTTCGGGTGTATCCGAAGGGTACACGCATTACCTCATCAAATTATAATCCATTAATTGGGTGGATGCATGGAGCTCAGATGGTTGCATTTAACATGCAGGGGTATGGGAGATCTCTTTGGTTGATGCAGGGAATGTTTAAAGCCAATGGAAGGTGTGGTTTTGTTAAAAAACCAGATTTTCTATTAAAGACTGGTCCCAATAATGAGGTTTTTGATCCTAAAGCTCCTTTGCCTGTGAAAACTACTTTGAAGGTGACTGTATATATAGGAGAAGGATGGTATTATGATTTCAAGCATACACACTTTGATCAATTCTCACCTCCTGATTTCTATGCAAGGGTGGGGATTGCTGGAGTCCCTTTCGATACTACTATGAAAAAAACTAAGTCAATAGAGGATAATTGGCTACCTTCTTGGAATGAGGTATTCGAGTTTCCTCTTTCTGTTCCGGAGTTGGCTCTCCTTCGCATCGAAGTTCATGAATATGACATGTCTGAGAAAGATGACTTTGGTGGCCAAACATGTTTACCCGTGTCGGAACTAAGAAGTGGAATTCGAGCAGTTCCATTACATTCCCGCAAAGATGTTAAATACAACAATGTTAAGCTTCTCATGCGCTTTGAATTCATCTGA 1788 0.4111 MSSKQKQTYSVCFCCRRRFKLGVSEAPPEIREFFHRYCDENGIMTASHLRRFLTEVQREEKITEEETQAIIDGHKHLSIFHRRGLNLESFFKFLFSDDNPPLLPSRGVHQDMTLPLSHYYIYTGHNSYLTGNQLSSDCSDAPIINALQRGVRVIELDIWPNDSKEDIHVLHGRTLTTPVALIKCLRSIKEYAFVASEYPVVITLEDHLTPDLQAKVAKMVTQTFGDILFCPSSESLKEFPSPESLKKRIIISTKPPKEYLEAKEGKEKGESQRGKPSDDEEAWGKEVPSLRGGTIADYKQNSGDDEDDLTEEDDDLDEAEKLGQNGSDEYRRLIAIHAGKPKGGLEEGLKVDPDKVRRLSLSESQLEKAAETYGKEIVRFTQRNILRVYPKGTRITSSNYNPLIGWMHGAQMVAFNMQGYGRSLWLMQGMFKANGRCGFVKKPDFLLKTGPNNEVFDPKAPLPVKTTLKVTVYIGEGWYYDFKHTHFDQFSPPDFYARVGIAGVPFDTTMKKTKSIEDNWLPSWNEVFEFPLSVPELALLRIEVHEYDMSEKDDFGGQTCLPVSELRSGIRAVPLHSRKDVKYNNVKLLMRFEFI 595
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g01471 595 Pfam Phosphatidylinositol-specific phospholipase C, X domain 112 254 IPR000909 -
Car05g01471 595 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 467 594 IPR035892 -
Car05g01471 595 SMART C2_3c 467 575 IPR000008 -
Car05g01471 595 SMART plcx_3 110 254 IPR000909 -
Car05g01471 595 SUPERFAMILY PLC-like phosphodiesterases 110 448 IPR017946 GO:0006629|GO:0008081
Car05g01471 595 MobiDBLite consensus disorder prediction 258 316 - -
Car05g01471 595 MobiDBLite consensus disorder prediction 258 286 - -
Car05g01471 595 ProSiteProfiles Phosphatidylinositol-specific phospholipase X-box domain profile. 110 254 - -
Car05g01471 595 PANTHER PHOSPHOINOSITIDE-SPECIFIC PHOSPHOLIPASE C FAMILY PROTEIN 5 595 IPR001192 GO:0035556
Car05g01471 595 Pfam C2 domain 488 569 IPR000008 -
Car05g01471 595 ProSiteProfiles Phosphatidylinositol-specific phospholipase Y-box domain profile. 360 446 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Car05g01471 595 CDD PI-PLCc_plant 109 434 - -
Car05g01471 595 Gene3D C2 domain 461 595 IPR035892 -
Car05g01471 595 CDD C2_PLC_like 465 594 - -
Car05g01471 595 SUPERFAMILY EF-hand 20 112 IPR011992 -
Car05g01471 595 Pfam Phosphoinositide-specific phospholipase C, efhand-like 29 98 IPR015359 -
Car05g01471 595 Gene3D - 25 104 - -
Car05g01471 595 Pfam Phosphatidylinositol-specific phospholipase C, Y domain 359 445 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Car05g01471 595 PRINTS Phospholipase C signature 115 133 IPR001192 GO:0035556
Car05g01471 595 PRINTS Phospholipase C signature 141 161 IPR001192 GO:0035556
Car05g01471 595 PRINTS Phospholipase C signature 238 255 IPR001192 GO:0035556
Car05g01471 595 PRINTS Phospholipase C signature 385 406 IPR001192 GO:0035556
Car05g01471 595 PRINTS Phospholipase C signature 406 424 IPR001192 GO:0035556
Car05g01471 595 PRINTS Phospholipase C signature 561 571 IPR001192 GO:0035556
Car05g01471 595 SMART plcy_3 330 447 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Car05g01471 595 Gene3D Phosphatidylinositol (PI) phosphodiesterase 107 460 IPR017946 GO:0006629|GO:0008081
Car05g01471 595 PANTHER PHOSPHOINOSITIDE PHOSPHOLIPASE C 5 595 - -
Car05g01471 595 ProSiteProfiles C2 domain profile. 448 577 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g01471 Car-Chr5 58942622 58946676 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g01471 6 595 Acyl Lipid Metabolism Gene Families AT3G55940 67.399 0.0 793
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g01471 K05857 - gmx:100784534 984.171
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car02g01701 02 46037913 46042793 Car05g01471 05 58942622 58946676 ECH
Car02g01338 02 39469115 39475097 Car05g01471 05 58942622 58946676 ECH
Car05g01471 05 58942622 58946676 Car05g01471 05 58942622 58946676 ECH
Car05g01471 05 58942622 58946676 Car02g01701 02 46037913 46042793 PCT