Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g01338 ATGGGTAGCTACCGAGTCTGCGTCTGCTTCCGGAGGAAGTTCAAGTCAGGGGAGGCAGAACCGCCCCACGAAATCCGAGAACTCTTCAACAAATACTCCGAAGGTGGGGCCCACATGACACCTGACCAACTCTGCCGCTTCCTCACCGAGGTTCAAGGCGAGGTAGTAAACGACAACGACCAACTCAACCCGCAGAAGTTGGTTGAGGATTTGTTGCACAAACGACATCACATTACCAAGTTCGCGAGGCATAATCTCACGTTAGATGATTTTCATCATTATCTTTTCTCCACTGATCTCAATCCTCCCATCAGATCTCAGGTTCATCAGGATATGACAGCTCCATTGACCCATTATTTCATATATACTGGCCATAACTCCTATCTCACTGGAAATCAACTCAGCAGTGATTGTAGTGATATCCCTATTATAAAGGCATTAAATAGAGGTGTGAGAGTTGTTGAGCTTGATATATGGCCCAATTCCACCAAAGATGATATTCTTGTTCTACATGGAAGGACATTAACAACACCTGTGGAGTTGATCAAATGTTTGAAATCCATTAAAGATCATGCTTTTTCTGCATCTCCCTACCCAGTCATAATAACTCTTGAAGACCATCTTACACCAGAACTTCAAGCAAAAGCTGCTCAGATGATTACTCAAACATTTGAAGATATGCTGTTCTGTCCAAACGATGAAAATTTAACCAATGTTCCTTCACCTGAAGAATTAAAGTATAGGATCATGATATCAACAAAACCTCCGAAAGAGTACTTAAAATCTGAAAGTGTGAGGAGGGAGAGTTCCAAACAATTGATGATATCAAAATCAAAGGATTCTGATGATGATGACTGGGGAAAGGAAGTTGCTGATGTTGCGAAAACTAAAAACGATGACAAGGGTGACTTTGATACAAATCAACAGAATGAGGATGAGGAATCAAATGATGAAGACTATGAAACAAATCAGGAGAGTGAATATAAGCGTTTAATCGCTATTCATGCTGGAAAACCTAAGGGTAGTTTGAAGGAAGCCTTAAAAGTTGAAGATGATAAAGTGAGACGCCTTAGCTTAAGTGAACAAGCTCTTGAAAAGGCTGCTGAATCACTTGGAACTGATCTTATTAGATTCACCCAGAAGAACTTTTTGAGGGTGTATCCGAAGGGTACGCGGGTCACCTCCTCAAACTACAAGCCACTTGTTGGATGGATGCATGGTGCTCAAATGGTTGCCTTCAATATGCAGGGATATGGCAAAAATCTTTGGTTGATGAATGGAATGTTTAGATCCAATGGGGGATGTGGTTATGTAAAAAAGCCAGACTTTCTAATGAATGTAGGTCCAAACAATGAGGTATTCAATCCTAAAGATAAGTTGCAGGTAAAGAAGACTCTTAAGGTCAAAATATATGTGGGTGATGGATGGCGTATGGATTTCAAACAAACTCATTTTGACTCATATTCTCCGCCTGATTTTTATGCCAGGGTTGGCATAGCTGGAGTGCCAGATGATGTAACAATGAAGAAAACAAAGATAATAGAAGATAACTGGATACCTGCATGGGACGAAGAGTTCACCTTTCCTTTAACTGTCCCTGAACTTGCTTTGCTCAGAGTGGAAGTTCATGAATATGACATGTCTGAGACAGATGATTTTGCTGGCCAAACTTGTTTACCAATTGCTGAACTCAAACAAGGGATCCGCGCAGTTCCACTCTTCGACCGAAAAGGAGAGAAGTACAATTCAGTTAGGCTTCTTATGCGATTCGATTTTATTTAA 1782 0.4091 MGSYRVCVCFRRKFKSGEAEPPHEIRELFNKYSEGGAHMTPDQLCRFLTEVQGEVVNDNDQLNPQKLVEDLLHKRHHITKFARHNLTLDDFHHYLFSTDLNPPIRSQVHQDMTAPLTHYFIYTGHNSYLTGNQLSSDCSDIPIIKALNRGVRVVELDIWPNSTKDDILVLHGRTLTTPVELIKCLKSIKDHAFSASPYPVIITLEDHLTPELQAKAAQMITQTFEDMLFCPNDENLTNVPSPEELKYRIMISTKPPKEYLKSESVRRESSKQLMISKSKDSDDDDWGKEVADVAKTKNDDKGDFDTNQQNEDEESNDEDYETNQESEYKRLIAIHAGKPKGSLKEALKVEDDKVRRLSLSEQALEKAAESLGTDLIRFTQKNFLRVYPKGTRVTSSNYKPLVGWMHGAQMVAFNMQGYGKNLWLMNGMFRSNGGCGYVKKPDFLMNVGPNNEVFNPKDKLQVKKTLKVKIYVGDGWRMDFKQTHFDSYSPPDFYARVGIAGVPDDVTMKKTKIIEDNWIPAWDEEFTFPLTVPELALLRVEVHEYDMSETDDFAGQTCLPIAELKQGIRAVPLFDRKGEKYNSVRLLMRFDFI 593
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g01338 593 Pfam Phosphatidylinositol-specific phospholipase C, X domain 112 254 IPR000909 -
Car02g01338 593 SMART C2_3c 465 573 IPR000008 -
Car02g01338 593 ProSiteProfiles C2 domain profile. 439 575 IPR000008 -
Car02g01338 593 Gene3D - 20 104 - -
Car02g01338 593 Pfam C2 domain 465 567 IPR000008 -
Car02g01338 593 MobiDBLite consensus disorder prediction 259 305 - -
Car02g01338 593 PANTHER PHOSPHOINOSITIDE-SPECIFIC PHOSPHOLIPASE C FAMILY PROTEIN 1 593 IPR001192 GO:0035556
Car02g01338 593 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 465 592 IPR035892 -
Car02g01338 593 Gene3D C2 domain 459 593 IPR035892 -
Car02g01338 593 Pfam Phosphatidylinositol-specific phospholipase C, Y domain 356 443 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Car02g01338 593 CDD C2_PLC_like 463 592 - -
Car02g01338 593 PRINTS Phospholipase C signature 115 133 IPR001192 GO:0035556
Car02g01338 593 PRINTS Phospholipase C signature 141 161 IPR001192 GO:0035556
Car02g01338 593 PRINTS Phospholipase C signature 238 255 IPR001192 GO:0035556
Car02g01338 593 PRINTS Phospholipase C signature 383 404 IPR001192 GO:0035556
Car02g01338 593 PRINTS Phospholipase C signature 404 422 IPR001192 GO:0035556
Car02g01338 593 PRINTS Phospholipase C signature 559 569 IPR001192 GO:0035556
Car02g01338 593 MobiDBLite consensus disorder prediction 306 321 - -
Car02g01338 593 SUPERFAMILY EF-hand 8 112 IPR011992 -
Car02g01338 593 ProSiteProfiles Phosphatidylinositol-specific phospholipase X-box domain profile. 110 254 - -
Car02g01338 593 MobiDBLite consensus disorder prediction 258 324 - -
Car02g01338 593 CDD PI-PLCc_plant 109 432 - -
Car02g01338 593 PANTHER PHOSPHOINOSITIDE PHOSPHOLIPASE C 1 593 - -
Car02g01338 593 Pfam Phosphoinositide-specific phospholipase C, efhand-like 23 100 IPR015359 -
Car02g01338 593 ProSiteProfiles Phosphatidylinositol-specific phospholipase Y-box domain profile. 358 444 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Car02g01338 593 SMART plcx_3 110 254 IPR000909 -
Car02g01338 593 Gene3D Phosphatidylinositol (PI) phosphodiesterase 106 458 IPR017946 GO:0006629|GO:0008081
Car02g01338 593 SMART plcy_3 328 445 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Car02g01338 593 SUPERFAMILY PLC-like phosphodiesterases 110 446 IPR017946 GO:0006629|GO:0008081
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g01338 Car-Chr2 39469115 39475097 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car02g01338 1 593 Acyl Lipid Metabolism Gene Families AT5G58700 63.545 0.0 788
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g01338 K05857 - tcc:18590491 893.649
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car02g01338 02 39469115 39475097 Car02g01338 02 39469115 39475097 ECH
Car02g01338 02 39469115 39475097 Car02g01701 02 46037913 46042793 ECH
Car02g01338 02 39469115 39475097 Car05g01471 05 58942622 58946676 ECH