Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g01701 ATGTCAAAACAAACATACAGTGTCTGCTTATGCTATCGTCGACGTTTCAAACTAGCTTTATCAGAAGCACCGCAAGAAATCAAGACCCTTTTTGATCAATACTCAGAAAATGAACTCATGACAGCTTCAAACCTCAAAAGATTCTTAATTGAAGTTCAGAGAGAAGAGAAAGCTACTGAAGAAGATGCACAAGCTATTATTGATAGTTTCAAGCATTTTCACAGAAGGGGTTTTGGTCTTAATCTTGAAACTTTTTTCAAGTTTCTCTTTGGTGATAGTAATTTTCCTCTTTTACCCTCTACTGGGGTACACCATGATATGACATTACCCTTGTCACATTATTTCATATATACCGGCCACAATTCCTATCTAACAGGGAATCAGCTGAGCAGTGTCTGCAGCGATATTCCAATCGTTAATGCATTGAAGAGAGGCGTAAGGGTAATTGAATTGGACATATGGCCTAATGCGTCAAAGGATGATGTTGATGTTCTTCATGGAAGGACATTGACTACTCCTGTAGAGCTCATTAGATGTTTGAGGTCTATTCGGGAACATGCCTTCGTCGCATCGGAATATCCAGTTATAATTACCTTAGAAGACCATCTTACTCCAGATCTTCAGGCTAAAGTTGCTGAGATGGTTACTCAAACATTCGGAGAAATACTATTTTCGCCTGACTCAGAAAGCATGAAGGAATTTCCTTCTCCTGAATCACTAAAAAAGAGGATTATTATATCAACCAAACCGCCTAAGGAGTACCTTGAGACAAAAGAAAAGGAAAAAGGAGATGATTCACACCAGGGAAAGTCTTCAGGCGACGATGAAGCTTGGGGGAAGGATATCCCGAGCTTCAAAAGTGGTTCAATATCTGATTACAAGGGAAGCAATTTGGATAAAGAAGATCTTAATGACGAGGAAGATATTTACGAATCAGACAAGTCACATCATAATGAAGCTCCAGAATATAAACGTTTAATTACCATTCATGCTGGGAAGTCGAAAGGAGGAATAGACGCATGGCTCAAAGTAGATCCTGATAAAGCGAGGCGTATAAGTTTAAGTGAGCAACAGCTTGAAAAGGCCACTATAACTCATGGAAAAGAAATTGTCAGGTTTACTCAGAGGAATATTCTGAGGGTGTTTCCAAAAGGTACTCGCATTGACTCGTCAAATTATAATCCATTAATTGGATGGAGTCATGGAGCTCAAATGGTTGCATTCAACATGCAGGGGTATGGAAGATCACTATGGTTGATGCAAGGAATGTTTAGAGCCAATGGAGGGTGTGGTTATGTTAAAAAACCAGATTTTCTCTTAGAGACTGGTCCGGATAATGAGGTCTTTGATCCTAAATCTAAGTTACCTGTGAAGACTACTTTGAAGGTGACTGTATATATGGGAGAAGGATGGTATTATGATTTCAAGCATACACACTTTGATCAATATTCACCTCCTGATTTCTATGCAAGAGTGGGGATTGCTGGAGTCCCTAATGACTCTATAATGAGAAAAACAAAAGCAATAGAAGATAATTGGCTACCTACATGGAACGAGGTATTCGAGTTCCCACTTACCGTTCCTGAACTCGCCTTGCTTCGTATCGAAGTTCACGAGTATGACATGTCTGAGAAAGATGACTTTGGTGGCCAAACATGCTTACCTGTTTCGGAGTTAAGAAGTGGCATTCGATCGGTTTCCTTGCATAGCCAGAAGGGAGAGAAATACAACTCTGTAAAGCTTCTTATGCGTTTCGAATTTCATTGA 1767 0.3967 MSKQTYSVCLCYRRRFKLALSEAPQEIKTLFDQYSENELMTASNLKRFLIEVQREEKATEEDAQAIIDSFKHFHRRGFGLNLETFFKFLFGDSNFPLLPSTGVHHDMTLPLSHYFIYTGHNSYLTGNQLSSVCSDIPIVNALKRGVRVIELDIWPNASKDDVDVLHGRTLTTPVELIRCLRSIREHAFVASEYPVIITLEDHLTPDLQAKVAEMVTQTFGEILFSPDSESMKEFPSPESLKKRIIISTKPPKEYLETKEKEKGDDSHQGKSSGDDEAWGKDIPSFKSGSISDYKGSNLDKEDLNDEEDIYESDKSHHNEAPEYKRLITIHAGKSKGGIDAWLKVDPDKARRISLSEQQLEKATITHGKEIVRFTQRNILRVFPKGTRIDSSNYNPLIGWSHGAQMVAFNMQGYGRSLWLMQGMFRANGGCGYVKKPDFLLETGPDNEVFDPKSKLPVKTTLKVTVYMGEGWYYDFKHTHFDQYSPPDFYARVGIAGVPNDSIMRKTKAIEDNWLPTWNEVFEFPLTVPELALLRIEVHEYDMSEKDDFGGQTCLPVSELRSGIRSVSLHSQKGEKYNSVKLLMRFEFH 588
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g01701 588 Gene3D - 22 99 - -
Car02g01701 588 ProSiteProfiles Phosphatidylinositol-specific phospholipase X-box domain profile. 105 249 - -
Car02g01701 588 SUPERFAMILY PLC-like phosphodiesterases 105 441 IPR017946 GO:0006629|GO:0008081
Car02g01701 588 MobiDBLite consensus disorder prediction 251 317 - -
Car02g01701 588 Pfam Phosphoinositide-specific phospholipase C, efhand-like 25 70 IPR015359 -
Car02g01701 588 Gene3D C2 domain 455 588 IPR035892 -
Car02g01701 588 PRINTS Phospholipase C signature 110 128 IPR001192 GO:0035556
Car02g01701 588 PRINTS Phospholipase C signature 136 156 IPR001192 GO:0035556
Car02g01701 588 PRINTS Phospholipase C signature 233 250 IPR001192 GO:0035556
Car02g01701 588 PRINTS Phospholipase C signature 378 399 IPR001192 GO:0035556
Car02g01701 588 PRINTS Phospholipase C signature 399 417 IPR001192 GO:0035556
Car02g01701 588 PRINTS Phospholipase C signature 554 564 IPR001192 GO:0035556
Car02g01701 588 ProSiteProfiles Phosphatidylinositol-specific phospholipase Y-box domain profile. 353 439 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Car02g01701 588 CDD C2_PLC_like 458 587 - -
Car02g01701 588 PANTHER PHOSPHOINOSITIDE PHOSPHOLIPASE C 2 587 - -
Car02g01701 588 Pfam Phosphatidylinositol-specific phospholipase C, X domain 107 249 IPR000909 -
Car02g01701 588 SUPERFAMILY EF-hand 17 106 IPR011992 -
Car02g01701 588 ProSiteProfiles C2 domain profile. 441 570 IPR000008 -
Car02g01701 588 Pfam Phosphatidylinositol-specific phospholipase C, Y domain 351 438 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Car02g01701 588 CDD PI-PLCc_plant 104 427 - -
Car02g01701 588 Gene3D Phosphatidylinositol (PI) phosphodiesterase 102 453 IPR017946 GO:0006629|GO:0008081
Car02g01701 588 SMART C2_3c 460 568 IPR000008 -
Car02g01701 588 SMART plcx_3 105 249 IPR000909 -
Car02g01701 588 Pfam C2 domain 461 562 IPR000008 -
Car02g01701 588 PANTHER PHOSPHOINOSITIDE-SPECIFIC PHOSPHOLIPASE C FAMILY PROTEIN 2 587 IPR001192 GO:0035556
Car02g01701 588 SMART plcy_3 323 440 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Car02g01701 588 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 460 587 IPR035892 -
Car02g01701 588 MobiDBLite consensus disorder prediction 251 281 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g01701 Car-Chr2 46037913 46042793 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car02g01701 1 587 Acyl Lipid Metabolism Gene Families AT3G55940 66.667 0.0 809
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g01701 K05857 - gmx:100037460 1043.11
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car02g01701 02 46037913 46042793 Car05g01471 05 58942622 58946676 ECH
Car02g01338 02 39469115 39475097 Car02g01701 02 46037913 46042793 ECH
Car02g01701 02 46037913 46042793 Car02g01701 02 46037913 46042793 ECH
Car05g01471 05 58942622 58946676 Car02g01701 02 46037913 46042793 PCT