Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g00913 ATGGATCAGCTTTCAACAATAGCTACATTTGAAAATGTGCATTATGGTATTGTGAGCCAAATGAGTTTTATTTGGGAGCAAGTTAGGGTACCCCTTATTGTTCCAATGCTGAAAGTTTTAGTCTTTTTGTGTTTGGCTATGTCAATTATGCTTTTTGTTGAAAAAGTTTATATGGGTATAGTTATAGTCTTTGTTAAGTTGTTTGGTCATAAACCAGATAAACATTACAAATGGGAGCCACTTAAGGATGATCTTGAGCTAGGAAATTCTGCTTTTCCAATGGTTTTGGTGCAAATTCCAATGTATAATGAGAAAGAGGTGTATCAACTATCAATTGGAGCTGCATGTGGGTTATCATGGCCATCTGATAGAATTATTATTCAAGTTCTTGATGACTCAACAGACCCAATCATTAAGAATATGGTGGAAGTGGAATGTAAGAGATGGGGTAGGAAAGGCATAAACATAAAGTATGAGATTAGGGAAAACAGAAATGGTTACAAAGCTGGTGCACTCAAAGAAGGAATGAAGCATAGCTATGTCAAACTCTGTGATTATGTTGCCATATTTGATGCTGATTTCCAACCTGATCCTAACTTCCTTCACCGCACCATCCCATTCCTTGATCAAAATCAAAAGGTTGCACTAGTCCAAGCTCGATGGCAATTCGTGAATGCTGATGAATGCTTAATGACAAGAATGCAAGAGATGTCATTGGACTATCATTTCCTTGTGGAGCAGGAAGTTGGTTCCTCAACTCATGCTTTCTTTGGTTTCAATGGCACAGCTGGTGTTTGGAGAATTTCAGCACTAAATGAAGCTGGTGGATGGAAGGACCGTACCACAGTGGAAGATATGGACCTAGCTGTCCGAGCTGGTCTCAGAGGCTGGAAATTTGTGTACCTTAGTGACCTTAAGGTGAAAAATGAATTGCCAAGTACCTTCAAAGCCTACCGTTATCAGCAGCACAGGTGGTCATGTGGCCCAGCTAATCTTTTCAGGAAAATGGCAATGGAAATCATAAGAAACAAGAGAGTCTCTATGTGGAAGAAGTTTTATGTGATTTATAGTTTTTTCTTTGTCCGGAAAATCATAGCACATGTGGTCACATTTACATTCTACTGTGTGATTTTGCCTGCAACTGTTTTAGTTCCAGAAGTAGAAGTTCCTAAGTGGGGTGCTGTTTATATACCTTGCATCATTACACTCCTTAATGCTGTTGGAACTCCAAGGTCATTACACTTATTGATATTGTGGATACTTTTTGAAAATGTTATGTCAATGCATAGAACCAAGGCAACACTTATAGGTTTGCTAGAGGTAGGTAGAGTAAATGAATGGGTAGTTACTGAGAAATTGGGTGATGTTCTCAAAACTAAATCAGGAGGTAAAGCGGCGAGAAAGCCTCGTATCAGGCTTGACGGAAGGCTTCACTTCCTAGAACTTGGTGTTGGGGTCTACCTCTTTTTCATTGGATGCTATGATGTTGCCTTTGGGAAGAATCACTGCTTCATATATCTTTTCATGCAATCTATTGCCTTCTTTGTTGTGGGGGTAGGCTATGTTGGCATCTTTGTTCCAAGTTCTTAG 1590 0.3937 MDQLSTIATFENVHYGIVSQMSFIWEQVRVPLIVPMLKVLVFLCLAMSIMLFVEKVYMGIVIVFVKLFGHKPDKHYKWEPLKDDLELGNSAFPMVLVQIPMYNEKEVYQLSIGAACGLSWPSDRIIIQVLDDSTDPIIKNMVEVECKRWGRKGINIKYEIRENRNGYKAGALKEGMKHSYVKLCDYVAIFDADFQPDPNFLHRTIPFLDQNQKVALVQARWQFVNADECLMTRMQEMSLDYHFLVEQEVGSSTHAFFGFNGTAGVWRISALNEAGGWKDRTTVEDMDLAVRAGLRGWKFVYLSDLKVKNELPSTFKAYRYQQHRWSCGPANLFRKMAMEIIRNKRVSMWKKFYVIYSFFFVRKIIAHVVTFTFYCVILPATVLVPEVEVPKWGAVYIPCIITLLNAVGTPRSLHLLILWILFENVMSMHRTKATLIGLLEVGRVNEWVVTEKLGDVLKTKSGGKAARKPRIRLDGRLHFLELGVGVYLFFIGCYDVAFGKNHCFIYLFMQSIAFFVVGVGYVGIFVPSS 529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g00913 529 SUPERFAMILY Nucleotide-diphospho-sugar transferases 90 371 IPR029044 -
Car04g00913 529 PANTHER - 9 528 - -
Car04g00913 529 Pfam Glycosyl transferase family group 2 186 380 IPR001173 -
Car04g00913 529 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 85 310 IPR029044 -
Car04g00913 529 PANTHER BNAC09G36340D PROTEIN 9 528 - -
Car04g00913 529 CDD CESA_CaSu_A2 93 329 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g00913 Car-Chr4 9019521 9023089 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g00913 2 528 Miscellaneous Gene Families AT5G03760 75.614 0.0 852
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g00913 K13680 - gmx:100797453 946.421
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g02570 03 71549191 71555508 Car04g00913 04 9019521 9023089 ECH
Car04g01971 04 23489363 23497233 Car04g00913 04 9019521 9023089 ECH
Car04g00913 04 9019521 9023089 Car04g00913 04 9019521 9023089 ECH