Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g02570 ATGGATCATCTTTCTTCTATCACTACTATACCTGATGCATTTCAAGGTGCAAAAGATGACATCACCATGCAATTTTTGTTGATTTGGAGTCAAATAAAAGCGCCATTGATTGTTCCATTACTAAGACTAGCAGTATTTTTGTGTTTAATCATGTCGGTGATGATGTTCATTGAGAGGGTTTACATGGGGATTGTGATTACACTTGTGAAACTATTTGGGAAAAAACCAGAAAAACGTTACAAATGGGAGCCAATAAAAGATGATATTGAGTTGGGGAACTCTTGTTACCCTATGGTTCTTGTTCAAATCCCTATGTACAATGAAAGAGAGGTTTATCAATTGTCAATTGGAGCTGCGTGTGGTCTTTCATGGCCTTCTGATAGGATCATTGTACAAGTTCTTGATGACTCCACTGACCCAACAATCAAGGAGTTGGTGCAGCTAGAATGCCAAAGATGGGCAAGCAAAGGTGTGAACATAAAGTATGAAGTTAGGGACAATAGAAATGGATATAAAGCAGGAGCACTCAAAGAAGGAATGAAACATAGCTACGTGAAACAATGTGATCTTGTTGCAATCTTTGATGCTGATTTTCAACCTGAGCCTGATTTCTTGTGGCGTAGCGTTCCATTTTTGGTTCACAATCCTGAACTTGGCCTTATTCAAGCTCGTTGGAAATTTGTGAATGCGGATGAATGTATGATGACTAGAATGCAAGAGATGTCACTAGATTACCATTTTACTGTCGAACAAGAAGTTGGCTCTTCCACTTATGCCTTCTTTGGCTTCAACGGGACTGCGGGAGTGTGGAGAATTGCGGCGCTGAATGAGGCTGGTGGGTGGAAAGATAGGACCACAGTTGAAGATATGGATTTGGCTGTTCGAGCTAGTCTCAAAGGATGGAAATTCTTATACTTGTCTAACTTGAAGGTTAAAAATGAATTGCCAAGTACTTTCAAGGCTTATCGCTACCAACAACATAGGTGGTCTTGTGGGCCGGCCAATCTTTTTAGAAAAATGGTCATGGAAATTATTAGAAATAAGAAAGTATCACTGTGGAAGAAGATACATGTAATTTATAGCTTCTTCTTTGTTCGGAAAGTCATAGCACACATCAATACGTTTGTGTTTTATTGCATTGTACTACCTGCAACAGTTTTGGTACCTGAGGTTTCAGTCCCAAAATGGGGAGCTGTTTATATCCCTTCACTCATCACTCTTCTCAATGCAGTTGGAACTCCAAGGTCACTTCATTTATTAGTCTTTTGGATTATGTTTGAGAATGTAATGTCTTTACATCGAGCAAAGGCAACTATTATTGGTCTATTGGAGGCTAGTCGAGTGAATGAATGGATTGTCACCGAGAAACTTGGAGATGCTGTCAAGACAAAAGTAAGAACTAAAGCACTGAAGAAGCCTCGTTTTAAGATTCAAGACAGGATTCACTTGTTAGAACTTGGTGTTGGAATGTATCTCGTCATTTGTGGCTGCTACGATGTTATGTTTGGGAAAAATCACTTCTACATCTTTCTTTTTATCCAAGCAATGGCCTTCTTCATAATGGCGTTTGGATATGTTGGAACTTTTGTTCCCAACTCATAA 1602 0.392 MDHLSSITTIPDAFQGAKDDITMQFLLIWSQIKAPLIVPLLRLAVFLCLIMSVMMFIERVYMGIVITLVKLFGKKPEKRYKWEPIKDDIELGNSCYPMVLVQIPMYNEREVYQLSIGAACGLSWPSDRIIVQVLDDSTDPTIKELVQLECQRWASKGVNIKYEVRDNRNGYKAGALKEGMKHSYVKQCDLVAIFDADFQPEPDFLWRSVPFLVHNPELGLIQARWKFVNADECMMTRMQEMSLDYHFTVEQEVGSSTYAFFGFNGTAGVWRIAALNEAGGWKDRTTVEDMDLAVRASLKGWKFLYLSNLKVKNELPSTFKAYRYQQHRWSCGPANLFRKMVMEIIRNKKVSLWKKIHVIYSFFFVRKVIAHINTFVFYCIVLPATVLVPEVSVPKWGAVYIPSLITLLNAVGTPRSLHLLVFWIMFENVMSLHRAKATIIGLLEASRVNEWIVTEKLGDAVKTKVRTKALKKPRFKIQDRIHLLELGVGMYLVICGCYDVMFGKNHFYIFLFIQAMAFFIMAFGYVGTFVPNS 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g02570 533 PANTHER - 2 532 - -
Car03g02570 533 Pfam Glycosyltransferase like family 2 98 332 - -
Car03g02570 533 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 90 312 IPR029044 -
Car03g02570 533 PANTHER BNAC09G36340D PROTEIN 2 532 - -
Car03g02570 533 CDD CESA_CaSu_A2 97 333 - -
Car03g02570 533 SUPERFAMILY Nucleotide-diphospho-sugar transferases 96 375 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g02570 Car-Chr3 71549191 71555508 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g02570 1 532 Miscellaneous Gene Families AT5G03760 80.113 0.0 924
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g02570 K13680 - gmx:100782772 999.193
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g02570 03 71549191 71555508 Car04g00913 04 9019521 9023089 ECH
Car03g02570 03 71549191 71555508 Car03g02570 03 71549191 71555508 ECH
Car03g02570 03 71549191 71555508 Car04g01972 04 23507321 23514763 PCT