Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g01971 ATGGTTGAATTTCAAGGAGCAAGTGATGAAGTTAGTTTACAACTTGAGTTTATTTGGAGACAAGTTAGAGAACCATTGATCGTGCCAATACTGAGAGTGGCAGTGTTTCTATGTTTGACCATGTCGTTGATGATGTTGGTTGAGAGGGTTTACATGGGCATTGTTATTTGTTTGGTCAAGTTGTTTGATAGAAAACCAGAAAAGCAATATAAATGGGAGAGTTTTAAGGATGATGTTGAGTTGGGAAACTCTAATTATCCAATGGTTCTTGTTCAAGTTCCAATGTACAATGAAAGAGAGGTTTATCAGCTATCAATTGGTGCTGCATGTGGACTCTCTTGGCCTTCTGATAGGATCATCATACAAATTCTTGATGATTCAACTGACCCAACAATCAAGGAGTTGGTGGAGCTAGAATGCCATAAATGGAGAAGCAAAGGTGTGAACATAAAGTATGAAGTTAGGGACAACAGAAATGGGTATAAAGCAGGTGCTCTAAAAGAAGGAATGAAGCATAGCTATGTGAAACAATGTGATTATGTTGCCATCTTTGATGCTGATTTTCAACCAGAACCTGATTTTCTTTGGCGAACCATTCCTTTCTTTGTTAATAATCCTGAAATTGGTCTTGTTCAGGCTCGCTGGAAGTTTGTGAATGCGGACGAATGTTTGATGACAAGGATGCAAGAAATGTCACTTGATTACCATTTTAGAGTGGAACAAGAAGTGGGGTCTTCCACCTACGCTTTTTTTGGCTTCAATGGGACTGCTGGTGTATGGAGAACTTTGGCTTTGAATGAAGCAGGTGGGTGGAAAGATAGGACCACAGTGGAAGACATGGACCTTGCTGTACGTGCCAGTCTCAAAGGATGGAAATTCTTATACCTCTCCAATTTAAAGGTTAAAAATGAATTGCCAAGTACTTTAAAGGCCTATAGATACCAACAACATCGATGGTCATGTGGGCCGGCCAATCTTTTCAGAAAAATGTTTAGGGAGATTGTGACAAACAAGAAAGTATCTTTTTGGAAGAAGATATATGTTGTTTACAGTTTTTTCTTTGTTCGAAAGATTGTGGCCCACATCAACACATTTGTGTTCTATTGCATTGTGTTACCTGCAACAGTTGTTGTGCCTGAGGTTGTGGTCCCTAAGTGGGGTGCTGTTTATATCCCTTCCATCATCACACTTCTAAATGCTGTTGGAACTCCAAGGTCACTTCATTTACTTCTCTTTTGGATTTTGTTTGAGAATACTATGTCTCTACATCGAACCAAGGCAACAATTATTGGTCTTTTAGAGGCTAGTAGGGTGAATGAATGGGTTGTTACTGAAAAACTTGGTGATGCTCTTAAGGGTAAAGTTGGTGGAAAAGGACTTAAAACATTTCGATTCAGGATTGTAGATAGGATTCACATGTTAGAACTTCTTGTTGGATTCTACCTCCTCTTCTGTGGTTGTTATGATCTTATGTATGGGAAAAATCACTTCTTCATATTTTTATACATCCAAGCACTTGCTTTCTTCATCATGGCATTTGGATATGTTGGCACTTTTATTCCGAACTCATAA 1572 0.3874 MVEFQGASDEVSLQLEFIWRQVREPLIVPILRVAVFLCLTMSLMMLVERVYMGIVICLVKLFDRKPEKQYKWESFKDDVELGNSNYPMVLVQVPMYNEREVYQLSIGAACGLSWPSDRIIIQILDDSTDPTIKELVELECHKWRSKGVNIKYEVRDNRNGYKAGALKEGMKHSYVKQCDYVAIFDADFQPEPDFLWRTIPFFVNNPEIGLVQARWKFVNADECLMTRMQEMSLDYHFRVEQEVGSSTYAFFGFNGTAGVWRTLALNEAGGWKDRTTVEDMDLAVRASLKGWKFLYLSNLKVKNELPSTLKAYRYQQHRWSCGPANLFRKMFREIVTNKKVSFWKKIYVVYSFFFVRKIVAHINTFVFYCIVLPATVVVPEVVVPKWGAVYIPSIITLLNAVGTPRSLHLLLFWILFENTMSLHRTKATIIGLLEASRVNEWVVTEKLGDALKGKVGGKGLKTFRFRIVDRIHMLELLVGFYLLFCGCYDLMYGKNHFFIFLYIQALAFFIMAFGYVGTFIPNS 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g01971 523 Pfam Glycosyltransferase like family 2 88 322 - -
Car04g01971 523 PANTHER - 1 522 - -
Car04g01971 523 PANTHER CELLULOSE SYNTHASE-LIKE PROTEIN A1 1 522 - -
Car04g01971 523 SUPERFAMILY Nucleotide-diphospho-sugar transferases 84 363 IPR029044 -
Car04g01971 523 CDD CESA_CaSu_A2 87 323 - -
Car04g01971 523 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 78 302 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g01971 Car-Chr4 23489363 23497233 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g01971 3 522 Miscellaneous Gene Families AT5G03760 76.154 0.0 868
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g01971 K13680 - gmx:100782772 917.146
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g01971 04 23489363 23497233 Car04g00913 04 9019521 9023089 ECH
Car04g01971 04 23489363 23497233 Car04g01971 04 23489363 23497233 ECH