Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g00885 ATGGCAAAGGCAGACAAGAAACCAGCGGAGAAGAAACCCGTCGCCGAGAAGTCACCAGTGGAGAAACCCAAGGCAGAAAAAAAGATCCCGAAGGACGTTTTGAAGCAGGTTCACCCTGACATCGGGATCTCAAGCAAGGCTATGGGGATCATGAATAGTTTCATCAATGATATTTTTGAGAAACTCGCTCAGGAATCTTCTAGACTCGCTCGATACAACAAGAAGCCTACTATCACATCTCGCGAGATTCAGACTGCTGTTCGTCTTGTTCTCCCTGCGAGTGATGAAACATGTAATCCTAGGAAGAGTGGTGAATGCATCTATGTTGCTAGTTTCCTCTCTAATAAGGATGATACTGAGCTATGCTGGCCTATATGTAATGACTTTTTGAAGTAA 396 0.4444 MAKADKKPAEKKPVAEKSPVEKPKAEKKIPKDVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPASDETCNPRKSGECIYVASFLSNKDDTELCWPICNDFLK 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g00885 131 MobiDBLite consensus disorder prediction 1 30 - -
Car04g00885 131 Coils Coil 131 131 - -
Car04g00885 131 Gene3D Histone, subunit A 1 116 IPR009072 GO:0046982
Car04g00885 131 Pfam Core histone H2A/H2B/H3/H4 33 89 IPR007125 GO:0003677
Car04g00885 131 PANTHER HISTONE H2B 33 93 IPR000558 GO:0000786|GO:0003677|GO:0030527
Car04g00885 131 PRINTS Histone H2B signature 45 65 IPR000558 GO:0000786|GO:0003677|GO:0030527
Car04g00885 131 PRINTS Histone H2B signature 26 44 IPR000558 GO:0000786|GO:0003677|GO:0030527
Car04g00885 131 PRINTS Histone H2B signature 67 84 IPR000558 GO:0000786|GO:0003677|GO:0030527
Car04g00885 131 PRINTS Histone H2B signature 84 97 IPR000558 GO:0000786|GO:0003677|GO:0030527
Car04g00885 131 SUPERFAMILY Histone-fold 31 93 IPR009072 GO:0046982
Car04g00885 131 PANTHER HISTONE H2B.1 33 93 - -
Car04g00885 131 SMART h2b3 24 105 IPR000558 GO:0000786|GO:0003677|GO:0030527
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g00885 Car-Chr4 8664631 8667078 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g00885 K11252 - gmx:100305731 146.747
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g02028 03 66472662 66476399 Car04g00885 04 8664631 8667078 ECH
Car04g02336 04 37147495 37154287 Car04g00885 04 8664631 8667078 ECH
Car04g00885 04 8664631 8667078 Car04g00885 04 8664631 8667078 ECH