Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g01972 ATGAAATTTGGAAGTAAAGAAATGGTTGTGTTTCTTCAAGAAGCAACTGATGGAGTTGGTTTGCAACTTGAATTAATATGGAAATATATCAGACAGCCATTGATTGTGCCAATGCTAAGAGTTGCAGTGTTTATATGTTTGACTATGTCGTTGATGATGTTGGTCGAGAAGGTTTACGCTGCCATTGTGATTAGTTGGGTGAAGTTATTTGGTAGAAAACCAGAGAAGGTTTACAAATGGGAGAGTTTTGAGGATGATGTTGAGATGGGAAGCTCTAATTATCCAATGGTTCTTGTTCAAGTCCCAATGTACAATGAAAAAGAGGTTTATCAGTTATCAATAGGTGCTGCTTGTGGACTCACTTGGCCTTGCGACAGGATAATCATACAAATTCTTGATGATTCAACTGACCCATCAATCAAGGAATTGGTGGAGCTAGAATGCCATAAATGGAGAAGCAAAGGTGTGAACATAAAGTATGAAGTTAGGGACAACAGAAATGGGTATAAAGCAGGTGCTCTAAAAGAAGGAATGAAACATAGCTATGTGAAACAATGTGATTATGTTGCCATCTTTGATGCTGATTTTCAACCAGAATCTGATTTTCTCTTGAGAACCATTCCTTTCCTTGTTAACAATCCTGAAATTGGTCTTGTTCAGGCTCGCTGGAACTTTGTGAACGCGGATGAATGTTGGATGACAAGAATGCAGCAAATGTCACTTGATTACCATTTTAAAGTGGAACAAGAAGTGGGGTCTTCCACTTACGCTTTCTTTGGCTTCAACGGAACTGCTGGTGTATGGAGAATTTCAGCTCTAAATGAAGCTGGTGGATGGAAAGATAGGACCACAGTCGAAGATATGGACTTAGCTGTACGTGCTAGTCTCAAAGGATGGAAATTCTTATTCCTCTCCAATATACAGGTTAAAAATGAATTGCCAAGTACTCTAAAGGCATATCGATACCAACAACATCGTTGGTCATGTGGGCCCGCCAATCTTTTTAGAAAAATGGTTATGGAGATTATGACAAACAATAGAGTGTCTTTATGGAAGAAAATATACGTTGTTTATAGTTTTTTCTTTGTTCGGAAGATTACGGCTCACATCAACACATTTGTATTCTATTGCCTTGTGTTACCTACAAGTGTTCTTGTGCCTGAGGTTTTTATCCCAACGTGGGGTATTGTTTATATTCCTTCCATCGTCACCCTTCTAAATGCTGTTGGAACTCCAAGGTCATTTTATTTAGTTGTCTTTTGGGTTCTCTTTGAGAATACTGTGGCTCTACATCGAACAAAAGGGACAATTATTGGTCTACTAGGAACTAGAAGAGTGAATGAATGGATTGTCACTGAAAAGCTTGGAGATGCTCTCAAGGTTAAAGGTGGTGATGGCAAAGGACTCAAAAAGTCTCAATTTAGGATTGGAGACAGGATATACATGTTAGAACTTCTTGTTGGATTGTATCTTCTCTTCTGTGGCACCTATGATCTTATGTATGGGAAAAATCACTTCTTCCTATTCATATACCTCCAATCAATTGCTTTCTTGATCATGGCATTTGGATATATTGGCACTTTTGTTCCCAACCCCTAG 1599 0.3859 MKFGSKEMVVFLQEATDGVGLQLELIWKYIRQPLIVPMLRVAVFICLTMSLMMLVEKVYAAIVISWVKLFGRKPEKVYKWESFEDDVEMGSSNYPMVLVQVPMYNEKEVYQLSIGAACGLTWPCDRIIIQILDDSTDPSIKELVELECHKWRSKGVNIKYEVRDNRNGYKAGALKEGMKHSYVKQCDYVAIFDADFQPESDFLLRTIPFLVNNPEIGLVQARWNFVNADECWMTRMQQMSLDYHFKVEQEVGSSTYAFFGFNGTAGVWRISALNEAGGWKDRTTVEDMDLAVRASLKGWKFLFLSNIQVKNELPSTLKAYRYQQHRWSCGPANLFRKMVMEIMTNNRVSLWKKIYVVYSFFFVRKITAHINTFVFYCLVLPTSVLVPEVFIPTWGIVYIPSIVTLLNAVGTPRSFYLVVFWVLFENTVALHRTKGTIIGLLGTRRVNEWIVTEKLGDALKVKGGDGKGLKKSQFRIGDRIYMLELLVGLYLLFCGTYDLMYGKNHFFLFIYLQSIAFLIMAFGYIGTFVPNP 532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g01972 532 PANTHER CELLULOSE SYNTHASE-LIKE PROTEIN A1 12 531 - -
Car04g01972 532 PANTHER - 12 531 - -
Car04g01972 532 SUPERFAMILY Nucleotide-diphospho-sugar transferases 91 369 IPR029044 -
Car04g01972 532 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 86 314 IPR029044 -
Car04g01972 532 CDD CESA_CaSu_A2 95 331 - -
Car04g01972 532 Pfam Glycosyl transferase family group 2 188 396 IPR001173 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g01972 Car-Chr4 23507321 23514763 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g01972 17 531 Miscellaneous Gene Families AT5G03760 72.427 0.0 818
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g01972 K13680 - gmx:100782772 843.958
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g02570 03 71549191 71555508 Car04g01972 04 23507321 23514763 PCT