Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g02532 ATGACATCATCATCTTCATGGTTCCTCAAAATGTGTCTCTCTTTTATAATGTTGTTGTTCTTCCTCATCTTCAATATTTCACCTTCATTCTCATCTCCAACAACTGCATCCCTCGCAGAAAAACTCATAAGAGGGATGAATCTTTTTCCAAAAGATTCCATTAACTTACCAGAGAATGATCCTCATTTTGTTCATGGAAATATTGTGGAGAAGAAGTTCACTTTCCCTGGTTTTGATGACACTAGTGCTTCTGCTGAAGAGCTCGGTCATCATGCAGGGTATTATCGTCTTCCTAATTCCAAAGCTGCAAGGATGTTTTATTTTTTCTTTGAATCTAGAAACAATAAGGATGACCCTGTTGTCATATGGTTGACTGGAGGTCCAGGATGCAGCAGTGAACTTGCTTTGTTTTATGAAAATGGTCCTTTTCAGTTTACCAAGAACAAGAAGAACTTGTCCCTTTTTTTGAATGAATATGGATGGGATAAGGCATCAAATATTATATTTGTAGACCAACCCACTGGAACAGGTTTCAGCTATACCACTGATGATAGTGATATTCGCCATGGTGAAGACGAAGTTAGCAATGATCTTTATGACTTCTTGCAGGCATTTTTCAAGGAACACCCTCAGTTCACTAAGAATGATTTTTATATTACTGGAGAATCATATGCTGGACATTACATTCCAGCTTTAGCATCCAGGGTTCATAAAGGAAACAAGGCAAAAGAAGGAATTCATATAAATCTAAAGGGTCTGGCTATTGGTAATGGATTAACCAATCCTGAAATTCAGTACAAGGCATATACAGAGTTTGCATTACAGAGAGATCTAATTACAAAAGATCAATATGACACTATTGGAAAGTTGATCCCACCATGTGAGCAAGCCATAAAAGCTTGTGAAACTAAAGGTGGAGATGCATGCGAGACTTCATTAAGTATTTGCACTGACATATTCAATCAGATCCTGGAGAATACTGACAACATTAATTACTATGACATTAGAAAGAAATGTGAGGGAAATCTTTGTTATGACTTCTCCAAGGTGGAGACATTTTTGAACAAGAAAACAGTAAAGGAAGCTTTAGGTGTTGGGGACTTGGACTTTGTTTCATGCAGTAGCACAGTATACAGTGCCATGCAGCAAGATTGGATGAGAAATCTAGAAGTTGGTATTCCTTCTCTTCTTGAGGATGGAATCAAGGTGCTTGTGTATGCTGGAGAAGAGGATCTCATATGCAATTGGCTTGGAAATTTTTGGTGGGTTCGTGATATGGTGTGGTCAGGTAAAAATGAATTTGGCGCGTCTCCTACAACCCCATTTTTGGTTGATGGTGAAGAAGCGGGAATGCTGCAAAGCCACGGGCCTCTCGCATTTCTCAAGGTGAAGGAGGCTGGTCACATGGTTCCTATGGATCAACCAAAAGCTGCACTTCAGATGTTAAAAGATTGGATGCAAGGGAAACTAACAAAGACTAGGAAAGGAGATAGTGTCTCGCCTATGTGA 1509 0.3923 MTSSSSWFLKMCLSFIMLLFFLIFNISPSFSSPTTASLAEKLIRGMNLFPKDSINLPENDPHFVHGNIVEKKFTFPGFDDTSASAEELGHHAGYYRLPNSKAARMFYFFFESRNNKDDPVVIWLTGGPGCSSELALFYENGPFQFTKNKKNLSLFLNEYGWDKASNIIFVDQPTGTGFSYTTDDSDIRHGEDEVSNDLYDFLQAFFKEHPQFTKNDFYITGESYAGHYIPALASRVHKGNKAKEGIHINLKGLAIGNGLTNPEIQYKAYTEFALQRDLITKDQYDTIGKLIPPCEQAIKACETKGGDACETSLSICTDIFNQILENTDNINYYDIRKKCEGNLCYDFSKVETFLNKKTVKEALGVGDLDFVSCSSTVYSAMQQDWMRNLEVGIPSLLEDGIKVLVYAGEEDLICNWLGNFWWVRDMVWSGKNEFGASPTTPFLVDGEEAGMLQSHGPLAFLKVKEAGHMVPMDQPKAALQMLKDWMQGKLTKTRKGDSVSPM 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g02532 502 SUPERFAMILY alpha/beta-Hydrolases 89 489 IPR029058 -
Car01g02532 502 ProSitePatterns Serine carboxypeptidases, serine active site. 219 226 IPR018202 GO:0004185
Car01g02532 502 PANTHER SERINE CARBOXYPEPTIDASE-LIKE 48-RELATED 31 490 - -
Car01g02532 502 Gene3D alpha/beta hydrolase 66 500 IPR029058 -
Car01g02532 502 Pfam Serine carboxypeptidase 86 488 IPR001563 GO:0004185|GO:0006508
Car01g02532 502 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 31 490 IPR001563 GO:0004185|GO:0006508
Car01g02532 502 PRINTS Carboxypeptidase C serine protease (S10) family signature 157 169 IPR001563 GO:0004185|GO:0006508
Car01g02532 502 PRINTS Carboxypeptidase C serine protease (S10) family signature 170 180 IPR001563 GO:0004185|GO:0006508
Car01g02532 502 PRINTS Carboxypeptidase C serine protease (S10) family signature 205 230 IPR001563 GO:0004185|GO:0006508
Car01g02532 502 PRINTS Carboxypeptidase C serine protease (S10) family signature 458 471 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g02532 Car-Chr1 51072605 51075721 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g02532 K16298 - gmx:100785987 777.704
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g02532 01 51072605 51075721 Car01g02532 01 51072605 51075721 ECH
Car01g02532 01 51072605 51075721 Car06g03439 06 64560868 64567075 PCT
Car06g03438 06 64536832 64540923 Car01g02532 01 51072605 51075721 PCT