Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g03439 ATGGGATTCTCCAAAACATCTCTATCTCTTTTGTTATTGTCGTTATACATTTTATTTTCTTCAACAGATGCAACATCTCGCATCACACATCGTCAATTGTTTAGAAAAACACCAATCTTTTCACCAAATGAACGAGCTGAAAAGCTCATAAAAAGCTTGAATTTATTCCCTAAGAATCCAGTTAATATTGTCAATAACTCTATTGATTTTGTCCCTGGAAAAATTGTTGAGAAACATTTTTCTATTCTTGGTGATTCCTATGAGCCTTCTATTGAAAATCTTGGTCACCATGCAGGGTACTATTCGCTTCCTCGTTCCAAAAGTGCAAGGATGTTCTATTTTTTCTTTGAATCACGAAAGAATACTAGTGATGACCCAATTGTGATATGGTTAACTGGAGGGCCAGGTTGCAGTAGTCAACTAGCTTTGTTTTATGAGAACGGTCCATTTCATATTTCCGATGACTTGTCTCTTGTATGGAATAACTATGGTTGGGACAAGGTATCAAATATTCTTTTTGTTGATCAACCCATTGGGACAGGTTTTAGCTACACTGCTGATGAGAGTGAAATTCCACATGATGAAATTGGTGTTAGCAATGATTTGTACGGCTTCTTGCAGGCATTTTTCAAGCAGCACTCTAATTTCGTTAAGAATGACTTTTATATCATTGGGGAATCATATGCTGGACACTTTGTTCCCGCTCTTGCGTCTCGAGTTCACCAAGGAAATAAAAACAAGGAAGGAATTAATATAAACCTCAAGGGTTTTGCTATTGGTAATGGATGGACAAACCCAATAATTCAGTACCCAGCATACACACAATATGCATTTGATATGAAATTGATTACAAAGAAAGATCAAGATCAAATCAACCAAATGATCCCAGGCTGTCAGGATGCCATAAAAACTTGCCAAAGTAAAGGTGGACAAAGTTGCTCGATAGCTCAAAATTCATGTGACAGCATAATGGGCAAAATTTTGCAAATTGCTGGCAACATTAATTACTATGACATCAGAAAGCAATGTGATGGGGACCTGTGTTATGACTTCTCATATGTGGATGATCTTTTAAATGATAATTCGGTTAAGGAGGCTTTAGGTGTTGGGAATGTGAAGTTTGTTTCATGCAGCACAGTAGTGTATAATGCTATGCTTCAAGATATGATGCAAAACCTTGATGTTGATATTCCTACACTTCTTGAAGATGGAATCAAAGTTCTTATATATGCAGGGGAACATGATCTTACTTGCAATTGGCTTGGAAATTTAAATTGGGTTCATGCCATGAAGTGGTCGGGTCAAAACCAATTTGCGTCATCCAAAACGCTTCAATTTTTGGTTGATGGTGCTCAAGCAGGACTATTGAATAGCTATGGACCTCTCTCTTTTCTAAAGGTGAATGGGGCTGGACATATGGTTCCTATGGATCAACCAAATGCAGCACTTCAAATGTTGGTAAATTGGATGGATGGAACACTGAACAAGTAG 1491 0.3742 MGFSKTSLSLLLLSLYILFSSTDATSRITHRQLFRKTPIFSPNERAEKLIKSLNLFPKNPVNIVNNSIDFVPGKIVEKHFSILGDSYEPSIENLGHHAGYYSLPRSKSARMFYFFFESRKNTSDDPIVIWLTGGPGCSSQLALFYENGPFHISDDLSLVWNNYGWDKVSNILFVDQPIGTGFSYTADESEIPHDEIGVSNDLYGFLQAFFKQHSNFVKNDFYIIGESYAGHFVPALASRVHQGNKNKEGININLKGFAIGNGWTNPIIQYPAYTQYAFDMKLITKKDQDQINQMIPGCQDAIKTCQSKGGQSCSIAQNSCDSIMGKILQIAGNINYYDIRKQCDGDLCYDFSYVDDLLNDNSVKEALGVGNVKFVSCSTVVYNAMLQDMMQNLDVDIPTLLEDGIKVLIYAGEHDLTCNWLGNLNWVHAMKWSGQNQFASSKTLQFLVDGAQAGLLNSYGPLSFLKVNGAGHMVPMDQPNAALQMLVNWMDGTLNK 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g03439 496 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 38 492 IPR001563 GO:0004185|GO:0006508
Car06g03439 496 Pfam Serine carboxypeptidase 93 491 IPR001563 GO:0004185|GO:0006508
Car06g03439 496 ProSitePatterns Serine carboxypeptidases, histidine active site. 462 479 IPR033124 GO:0004185
Car06g03439 496 PANTHER SERINE CARBOXYPEPTIDASE-LIKE 48-RELATED 38 492 - -
Car06g03439 496 ProSitePatterns Serine carboxypeptidases, serine active site. 223 230 IPR018202 GO:0004185
Car06g03439 496 SUPERFAMILY alpha/beta-Hydrolases 94 493 IPR029058 -
Car06g03439 496 Gene3D alpha/beta hydrolase 76 495 IPR029058 -
Car06g03439 496 PRINTS Carboxypeptidase C serine protease (S10) family signature 161 173 IPR001563 GO:0004185|GO:0006508
Car06g03439 496 PRINTS Carboxypeptidase C serine protease (S10) family signature 174 184 IPR001563 GO:0004185|GO:0006508
Car06g03439 496 PRINTS Carboxypeptidase C serine protease (S10) family signature 209 234 IPR001563 GO:0004185|GO:0006508
Car06g03439 496 PRINTS Carboxypeptidase C serine protease (S10) family signature 462 475 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g03439 Car-Chr6 64560868 64567075 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g03439 K16298 - gmx:100789937 674.855
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g02532 01 51072605 51075721 Car06g03439 06 64560868 64567075 PCT