Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g03438 ATGGGATTCTCCAAAACATCTCTATCTCTTTTGTTATTGTCGTTATACATTTTATTTTCTTCATCAGATGCAACATCTCGCATCACACATCGTCAATTGTTTAGAAAGACACCAACCTTTTCACCAAATCAACGAGCTGAAAAGCTCATAAAAAGCTTGAATTTATTTCCTAAGAATCCAGCTAATATTGTCAATAACTCTATTGATTTTGTCCCTGGAAAAATTGTTGAGAAAAAGTTTTCGTTTCTTAGTGGTTCCTCTGAGCCTTCTATTGAAAATCTTGGTCATCATGCAGGGTACTATTCCCTTCCTCGTTCCAACAGTTCAAGGTTGTTCTATTTTTTCTTCGAATCACGAAACAGTACTAGAGATGACCCAGTTGTGATATGGTTAACTGGAGGTCCAGGTTGCAGTGGTAACCTAGCTTTGTTTTATGAGAATGGTCCTTTCCATATTTCCAATGATTTGTCTCTTGTATGGAATAACTATGGCTGGGACAAGGCATCAAATATTATTTTTGTTGACCAACCCGTTGGGACAGGTTTTAGCTACACTTCTGATGAGAATGAAATTCCACATAATGAAAATGGGGTTAGCAATGATTTGTACGACTTCTTACAGGAGTTTTACAAACAACATCCTAATTTAGTTAAGAATGACTTTTACATTACTGGAGAATCATATGCTGGACACTATATTCCAGCTCTTGCATCTCGTGTTCACAAAGGAAATAAAGACAACAAAGGAATTCATATAAACCTCAAGGGTTTTGCTATTGGTAATGGATTGACACACCCACTAATTCAGTACCCAGCATACACACAATATGCATTTGATATGAAATTGATTACAAAGGAAGATAAAGATCGAATCGACGACCAGGTCCCAGGCTGTGAGGATACCATTAAATCTTGCGAAGAAAGTGGAGGTGGACAAAATTGCTTGATAGCTATAAATACATGTGAAACCATAATGGAAAGTATTTTGGAAGTTGCTGGCAACGTTAATTACTATGACGTCAGAAAGCAATGTGAAGGGTCGTTGTGTTATGACTTCTCAAATGTTGAGACACTTTTAAATGATAATTCGGTTAAGGAGGCTTTAGGTGTTGGGAATGTGGATTTTGTTTCATGCAGCAAAATAGTGTATAATTCTATGCTTGAAGATTGGATGCAAAACCTTGAAGTTGATATTCCTACACTTCTTGAAGATGGAATCAAAGTTCTTATATATGCAGGGGAATATGATCTTATTTGCAACTGGCTTGGGAATTCAAAATGGGTTCATGCGATGGAGTGGTCAGGTCAAAAACAGTTTGCAGACTCCAAAACAGTTCCATTTTTGGTTGATGGTGCACAAGCTGGATCATTGAATAGCTATGGACCTCTCTCTTTTCTAAAGGTGAAAGGGGCTGGACATATGGTTCCTATGGATCAACCAAAAGCTGCACTTCAAATGTTGGTAACTTGGATGCATGGAACACTGAATATATAG 1494 0.3735 MGFSKTSLSLLLLSLYILFSSSDATSRITHRQLFRKTPTFSPNQRAEKLIKSLNLFPKNPANIVNNSIDFVPGKIVEKKFSFLSGSSEPSIENLGHHAGYYSLPRSNSSRLFYFFFESRNSTRDDPVVIWLTGGPGCSGNLALFYENGPFHISNDLSLVWNNYGWDKASNIIFVDQPVGTGFSYTSDENEIPHNENGVSNDLYDFLQEFYKQHPNLVKNDFYITGESYAGHYIPALASRVHKGNKDNKGIHINLKGFAIGNGLTHPLIQYPAYTQYAFDMKLITKEDKDRIDDQVPGCEDTIKSCEESGGGQNCLIAINTCETIMESILEVAGNVNYYDVRKQCEGSLCYDFSNVETLLNDNSVKEALGVGNVDFVSCSKIVYNSMLEDWMQNLEVDIPTLLEDGIKVLIYAGEYDLICNWLGNSKWVHAMEWSGQKQFADSKTVPFLVDGAQAGSLNSYGPLSFLKVKGAGHMVPMDQPKAALQMLVTWMHGTLNI 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g03438 497 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 34 493 IPR001563 GO:0004185|GO:0006508
Car06g03438 497 PANTHER SERINE CARBOXYPEPTIDASE 3 34 493 - -
Car06g03438 497 SUPERFAMILY alpha/beta-Hydrolases 94 494 IPR029058 -
Car06g03438 497 Pfam Serine carboxypeptidase 93 493 IPR001563 GO:0004185|GO:0006508
Car06g03438 497 PRINTS Carboxypeptidase C serine protease (S10) family signature 161 173 IPR001563 GO:0004185|GO:0006508
Car06g03438 497 PRINTS Carboxypeptidase C serine protease (S10) family signature 174 184 IPR001563 GO:0004185|GO:0006508
Car06g03438 497 PRINTS Carboxypeptidase C serine protease (S10) family signature 209 234 IPR001563 GO:0004185|GO:0006508
Car06g03438 497 PRINTS Carboxypeptidase C serine protease (S10) family signature 463 476 IPR001563 GO:0004185|GO:0006508
Car06g03438 497 Gene3D alpha/beta hydrolase 74 496 IPR029058 -
Car06g03438 497 ProSitePatterns Serine carboxypeptidases, serine active site. 223 230 IPR018202 GO:0004185
Car06g03438 497 ProSitePatterns Serine carboxypeptidases, histidine active site. 463 480 IPR033124 GO:0004185
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g03438 Car-Chr6 64536832 64540923 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g03438 K16298 - gmx:100798795 676.781
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g03438 06 64536832 64540923 Car01g02532 01 51072605 51075721 PCT