Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g00917 ATGAATAGAAGCTTTTCATCTTTTGCCATTCACATTCTTCTCTTAATTTCAATTCCCTTCACATCATCTCAAACAGATGAAAACAACAATTTAATAGACCAAATATGCAAAAAAACACCCTTTTACGACCTTTGCACTTCAATCCTAAACTCAAACCCACTAACCCCAAAAACCGATCTCAAAAGTGTAGCACTTGTAATGGTAAACAACATTCTAACAAACGCAAGTGACACATTAAATTACATTGAAGGGTTAATTAAGAAAACCTCAGATCGTGAAATGGAACAAGCTTTGGCTTTTTGTGCTGAGTCATACATCCCAGTTGTTAAATACACCCTCCCTCAAGCTGCTGATGCTATCACACAAAACCGTTTTGGATTTGCAAGTTATTGTGTTTCTGATGCTGTTAAGGAAGTTAATTCTTGTAACAAGAAATTTTTAGGCTCTGTTACTCTTTTGTCACCATTAGGGGATAGAAATGGTATTGTGCAGAAGCTTGTCGATGTTGCTTCTGCTATTATTAAACAACTATTGAAGGGTTGA 543 0.3573 MNRSFSSFAIHILLLISIPFTSSQTDENNNLIDQICKKTPFYDLCTSILNSNPLTPKTDLKSVALVMVNNILTNASDTLNYIEGLIKKTSDREMEQALAFCAESYIPVVKYTLPQAADAITQNRFGFASYCVSDAVKEVNSCNKKFLGSVTLLSPLGDRNGIVQKLVDVASAIIKQLLKG 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g00917 180 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 28 177 IPR035513 -
Car01g00917 180 Gene3D Invertase/pectin methylesterase inhibitor family protein 26 178 IPR035513 -
Car01g00917 180 SMART PMEI_2 27 173 IPR006501 GO:0004857
Car01g00917 180 TIGRFAM PME_inhib: pectinesterase inhibitor domain 8 177 IPR006501 GO:0004857
Car01g00917 180 Pfam Plant invertase/pectin methylesterase inhibitor 30 173 IPR006501 GO:0004857
Car01g00917 180 PANTHER PLANT INVERTASE/PECTIN METHYLESTERASE INHIBITOR 10 180 - -
Car01g00917 180 CDD CIF_like 29 177 IPR034087 GO:0004857|GO:0043086
Car01g00917 180 PANTHER PECTINESTERASE INHIBITOR-LIKE 10 180 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g00917 Car-Chr1 8457185 8457972 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g00917 - - gmx:100527840 261.922
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g00917 01 8457185 8457972 Car01g00917 01 8457185 8457972 ECH
Car07g00485 07 4289419 4289940 Car01g00917 01 8457185 8457972 PCT
Car01g00917 01 8457185 8457972 Car07g00483 07 4281553 4282065 PCT