Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g00483 ATGTCAATGATAAAACCATTTATTCTCATTTTGTGCACAATTGTTGTTGTAACTCAAGGAAAAACTGTAACCACAAATAATGCAAATTTAATACAACAAACTTGTAGGAAGACACCAAATTATGGTCTTTGCATTCAGTACTTGAATGGTAGCCCAGGAAGTTCTACTGCAGATGTAAATGGTTTAGCACAAATCATGGTTAACGTAATTAAGACCAAAGCAAGCATTGCCTTGAACAAAATTCATCAAATTATTGGAAGGAGTGCACAAAAGGTGGCACTAAATTCATGTGTTGATAAATACAATGCAGTTTTGGTAGCTGATATTCCACAAGCTATTCAAGCTTTGCAAAGAGGAAATCCAAAATTTGCAGAAGATGGTGCGAATGATGCTGCTGTTGAGGCCAACAGCTGTGAGAATGGCTTCTCTGGAAAATCACCACTCACTGCTGAAAATCGTGCTACACAAGATGCAGCTGCCATAACCGCAGCTATTGTTAGATTATTGCTCTAG 513 0.3762 MSMIKPFILILCTIVVVTQGKTVTTNNANLIQQTCRKTPNYGLCIQYLNGSPGSSTADVNGLAQIMVNVIKTKASIALNKIHQIIGRSAQKVALNSCVDKYNAVLVADIPQAIQALQRGNPKFAEDGANDAAVEANSCENGFSGKSPLTAENRATQDAAAITAAIVRLLL 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g00483 170 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 28 169 IPR035513 -
Car07g00483 170 Gene3D Invertase/pectin methylesterase inhibitor family protein 26 170 IPR035513 -
Car07g00483 170 CDD CIF_like 28 169 IPR034087 GO:0004857|GO:0043086
Car07g00483 170 SMART PMEI_2 26 165 IPR006501 GO:0004857
Car07g00483 170 PANTHER PECTINESTERASE INHIBITOR-LIKE 10 170 - -
Car07g00483 170 TIGRFAM PME_inhib: pectinesterase inhibitor domain 8 169 IPR006501 GO:0004857
Car07g00483 170 Pfam Plant invertase/pectin methylesterase inhibitor 29 165 IPR006501 GO:0004857
Car07g00483 170 PANTHER PLANT INVERTASE/PECTIN METHYLESTERASE INHIBITOR 10 170 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g00483 Car-Chr7 4281553 4282065 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g00483 - - gmx:100795394 168.703
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g00483 07 4281553 4282065 Car07g00483 07 4281553 4282065 ECH
Car01g00917 01 8457185 8457972 Car07g00483 07 4281553 4282065 PCT