Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g00485 ATGAAGAAAATTTCAATTTGTGTCTCATTTTTATTTATCAACCTTCTTCATGTGTCTTGTTCACTTGTTCCACAAAATAATGATTTAGTGGACCAAGTATGCAAAAAGACACCATATTATGATTTATGCATTTCCACACTACAATCCAATCCTCAAGCCAAAAATACTGATACTAAGGGTATAGCCCTTATAATGGTGAAGGATATTGTATCAAATCTTAATGACACATTGAATTTCACTCAAGGTCTTATAAAAAAAACATCTGACGTGGGTTTGAAGAAAAACTTAGATTTTTGTGCTGAGACATACATTCCATTGGTGAAATATGTTCTGCCACAAGCAGCAGATGCTGTAAACCAAAGTAGATTTGAGTATGCGAATTACTCCATCAATGATGCTGGAAAGGAAATTGGTTCTTGTAACAATAAATTCTCAGGCTCAACAACTTCACCCTTAAGTGATAGGAATGTCACTATACAAAAATTGTTTGATATTGCTTCTGCCATACTAAAACTTTTATAA 522 0.3295 MKKISICVSFLFINLLHVSCSLVPQNNDLVDQVCKKTPYYDLCISTLQSNPQAKNTDTKGIALIMVKDIVSNLNDTLNFTQGLIKKTSDVGLKKNLDFCAETYIPLVKYVLPQAADAVNQSRFEYANYSINDAGKEIGSCNNKFSGSTTSPLSDRNVTIQKLFDIASAILKLL 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g00485 173 CDD CIF_like 27 173 IPR034087 GO:0004857|GO:0043086
Car07g00485 173 Gene3D Invertase/pectin methylesterase inhibitor family protein 25 173 IPR035513 -
Car07g00485 173 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 26 173 IPR035513 -
Car07g00485 173 PANTHER PLANT INVERTASE/PECTIN METHYLESTERASE INHIBITOR 11 173 - -
Car07g00485 173 Pfam Plant invertase/pectin methylesterase inhibitor 28 169 IPR006501 GO:0004857
Car07g00485 173 PANTHER PECTINESTERASE INHIBITOR-LIKE 11 173 - -
Car07g00485 173 TIGRFAM PME_inhib: pectinesterase inhibitor domain 4 172 IPR006501 GO:0004857
Car07g00485 173 SMART PMEI_2 25 169 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g00485 Car-Chr7 4289419 4289940 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g00485 - - cam:101496253 306.219
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g00485 07 4289419 4289940 Car07g00485 07 4289419 4289940 ECH
Car07g00485 07 4289419 4289940 Car01g00917 01 8457185 8457972 PCT