Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g00663 ATGTCTAAGCCCTCCTTCAAGATTCAACATCCTCTGGAAAGAAGACAGGCTGAAGCTTCTCGCATTAGAGAGAAGTATCCCGATAGAGTACCTGTGATTGTGGAGAAAGCTGGAAGAAGTGACATTGCAGACATTGACAAGAAGAAGTACCTTGTCCCAGCTGACTTGTCTGTTGGTCAATTTGTCTATGTTGTCCGCAAAAGAATTAAGCTCAGTGCAGAGAAGGCTATCTTTGTTTTCATCAATAACACTCTACCTCCAACTGCTGCTCTGATGTCTGCTCTTTATGAGGAACATAAGGATGAGGATGGCTTTCTTTACATGACTTACAGTGGAGAGAACACCTTTGGATCTCACTAG 360 0.4306 MSKPSFKIQHPLERRQAEASRIREKYPDRVPVIVEKAGRSDIADIDKKKYLVPADLSVGQFVYVVRKRIKLSAEKAIFVFINNTLPPTAALMSALYEEHKDEDGFLYMTYSGENTFGSH 119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g00663 119 MobiDBLite consensus disorder prediction 1 20 - -
Car01g00663 119 PANTHER MICROTUBULE-ASSOCIATED PROTEINS 1A/1B LIGHT CHAIN 3-RELATED 1 117 IPR004241 -
Car01g00663 119 CDD Ubl_ATG8 12 114 - -
Car01g00663 119 PANTHER AUTOPHAGY-RELATED PROTEIN 1 117 - -
Car01g00663 119 SUPERFAMILY Ubiquitin-like 4 117 IPR029071 -
Car01g00663 119 Gene3D - 1 117 - -
Car01g00663 119 Pfam Autophagy protein Atg8 ubiquitin like 14 117 IPR004241 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g00663 Car-Chr1 5555956 5558949 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g00663 K08341 - gmx:100527884 222.246
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g00663 01 5555956 5558949 Car01g00663 01 5555956 5558949 ECH
Car01g02297 01 48745502 48748179 Car01g00663 01 5555956 5558949 ECH
Car06g03265 06 60613649 60615291 Car01g00663 01 5555956 5558949 ECH