Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g03265 ATGTTCTCTAATTTATACAAACATTACATGCCAGAAAGGAGGCAGGCTGAAGCAGCTCGCATAAGAGAGAAGTATCCTGATAGAATTCCAGTAATTGTTGAGAGGGCGGAGAAGAGTGATGTTCCTGAAATTGATAAGAAAAAGTATCTTTTTGTATATGTGGTGAGGAAGAGAATCAAGCTGAGTCCTGAAAAGGCCATCTTCATTTTTGTCAAGAACATTTTACCACCAACTGCGGCTATGATGTCTGCAATTTACGAAGAAAACAAGGATGAAGATGGATTTCTATATATGACCTACAGTGGGGAGAACACATTTGGGATGATGATCTAA 333 0.3874 MFSNLYKHYMPERRQAEAARIREKYPDRIPVIVERAEKSDVPEIDKKKYLFVYVVRKRIKLSPEKAIFIFVKNILPPTAAMMSAIYEENKDEDGFLYMTYSGENTFGMMI 110
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g03265 110 Gene3D - 3 108 - -
Car06g03265 110 SUPERFAMILY Ubiquitin-like 8 107 IPR029071 -
Car06g03265 110 Pfam Autophagy protein Atg8 ubiquitin like 13 107 IPR004241 -
Car06g03265 110 PANTHER MICROTUBULE-ASSOCIATED PROTEINS 1A/1B LIGHT CHAIN 3-RELATED 12 107 IPR004241 -
Car06g03265 110 PANTHER AUTOPHAGY-RELATED PROTEIN 12 107 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g03265 Car-Chr6 60613649 60615291 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g03265 K08341 - gmx:100301895 181.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g03265 06 60613649 60615291 Car06g03265 06 60613649 60615291 ECH
Car06g03265 06 60613649 60615291 Car01g00663 01 5555956 5558949 ECH