Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva14g01465 ATGGGGGCGTACAGGGCAGATGACGATTACGATTATCTCTTCAAGGTGGTCTTGATCGGTGATTCTGGTGTCGGAAAATCCAATCTTTTGTCCAGGTTCAGCAGGAATGAATTCAGCCTTGAATCCAAGTCCACCATCGGGGTCGAGTTCGCTACCAGAAGCATTCGGGTCGAAGATAAGGTTGTCAAGGCTCAGATTTGGGATACCGCTGGCCAAGAAAGgtATCGTGCAATAACCAGTGCATATTATAGAGGTGCTGTTGGTGCTTTACTAGTCTACGATGTTACCCGCCATGTTACTTTTGAAAATGTGGAGAGATGGCTGAAGGAGCTCAGAGATCACACAGATGCGAGCATCGTCGTCATGCTGGTAGGCAACAAAGCAGATCTGCGCCATCTGCGCGCCGTCTCCACCGAAGATGCTACGAGTTTTgcagaaaaggagaaaactttCTTCATGGAAACATCTGCTCTTGAGTCCACCAATGTTGAAAGTGCCTTCACGGAGGTGCTGACCCAGATTTATCATGTTGTGAGCAAAAAGGCTCTTGACATCGGCGATGATACAACAACTTTACCTAAAGGACAGACAATTAACGTTGGATCAAAGGATGATGTATCAGCTGTGAAGAAAGCTGGATGTTGCTCTTCTTG 653 0.4564 MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFSRNEFSLESKSTIGVEFATRSIRVEDKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDASIVVMLVGNKADLRHLRAVSTEDATSFAEKEKTFFMETSALESTNVESAFTEVLTQIYHVVSKKALDIGDDTTTLPKGQTINVGSKDDVSAVKKAGCCSS 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva14g01465 217 SMART ran_sub_2 19 208 - -
Bva14g01465 217 ProSiteProfiles small GTPase Ras family profile. 8 217 IPR001806 GO:0003924|GO:0005525
Bva14g01465 217 SMART rab_sub_5 14 177 - -
Bva14g01465 217 Pfam Ras family 15 175 IPR001806 GO:0003924|GO:0005525
Bva14g01465 217 PRINTS Transforming protein P21 ras signature 152 174 - -
Bva14g01465 217 PRINTS Transforming protein P21 ras signature 14 35 - -
Bva14g01465 217 PRINTS Transforming protein P21 ras signature 37 53 - -
Bva14g01465 217 PRINTS Transforming protein P21 ras signature 117 130 - -
Bva14g01465 217 PRINTS Transforming protein P21 ras signature 55 77 - -
Bva14g01465 217 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 9 181 IPR027417 -
Bva14g01465 217 Gene3D - 6 215 IPR027417 -
Bva14g01465 217 TIGRFAM small_GTP: small GTP-binding protein domain 12 170 IPR005225 GO:0005525
Bva14g01465 217 ProSiteProfiles small GTPase Rho family profile. 7 175 - -
Bva14g01465 217 PANTHER DRAB11-RELATED 1 215 - -
Bva14g01465 217 SMART rho_sub_3 16 173 IPR001806 GO:0003924|GO:0005525
Bva14g01465 217 CDD Rab11_like 11 175 - -
Bva14g01465 217 PANTHER RAS-RELATED PROTEIN RABA1F-LIKE 1 215 - -
Bva14g01465 217 SMART ras_sub_4 11 177 - -
Bva14g01465 217 ProSiteProfiles small GTPase Rab1 family profile. 9 215 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva14g01465 Bva-Chr14 7504440 7506848 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva14g01465 K07904 - zju:107417181 404.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva14g01465 14 7504440 7506848 Bva14g01465 14 7504440 7506848 ECH
Bva09g00899 09 4638255 4638978 Bva14g01465 14 7504440 7506848 ECH
Bva09g00678 09 3491870 3493782 Bva14g01465 14 7504440 7506848 ECH
Bva07g01893 07 16966452 16970303 Bva14g01465 14 7504440 7506848 ECH