Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g03303 ATGGCGCACGGGACCCAAACCCTTACAGTTACCGACTCTGAAAGCCAAGATTCCAATTCCGCCAGTGAAAGTCCTCCTCCCCCAGCAGGTCCCCTTTCTTCTCCCACCCAAAACCCTAGCTCTCCTAATCTGACCACTGGTTCGGATGCCACCCGAATTCCATCCCTCCTCCATCTCTCCTTCAATCAGGATTCCGGTTGCTTCGCTGCCGGCACCGATCACGGCTTCCGTATCTATAATTGTGACCCTTTTCGTGAGATCTTTCGGCGGGAATTTGGCCCTGGTGGTGGAATTGGATTGGTCCAGATGTTGTTTCGGTGCAACATACTTGCCTTCGTCGGCGGCGGTTCTGACCCGAGGTATCCTGTTAATAAAGTGATGATTTGGGACGACCATCAGTCCCGGTGCATCGGCGAGCTATCATTTCGATCTGAGGTCAAAGGGGTTCGTCTCAGAAGGGACCGAATTGTGGTAGTTCTGGCGCATAAGATTTTTGTGTACAATTTTACAGATCTTAAGGTGTTGCACCAAATTGAGACAATTGCCAACCCCAAGGGACTTTGTGAGGTTTCGCACGTTTCAGGGACAATGGTATTGGTCTGTCCTGGATTACAGAAGGGTCAGGTAAGGGTCGAGCATTACGCGTCTAAGCGGACAAAGTTTATCATGGCGCACGATTCCAGAATTGCTTGCTTCGCGCTCACGCAAGATGGGCGGTTGCTTGCCACGGCCAGCAGTAAAGGGACTCTCGTCAGGATTTTCAATACTTTGGATGGTTCATTGCTCCAGGAGGTACGGAGAGGGGCTGACCGAGCTGAGATATACAGCCTTGCTTTCTCTGCTACTGCACAGTGGCTGGCTGTCTCAAGTGACAAGGGAACCGTTCACGTCTTTGGCTTAAAGGTTGATTCAGGATTATTGGGGCATGACAGATCATGTAATGCAACTGAGTCTAATGCTACCAACCCCTCAACAgtttcatctctttctttcatcaaaGGTGTGCTGCCTAAGTATTTTAGCTCAGAGTGGTCTGTGGCTCAGTTTCGCTTGCATGAAGGTGCGCAATATGTCGTTGCTTTCGGCCACCAAAAGAACACAATTGTAATACTTGGCATGGATGGCAGCTTTTATCGATGCCAGTTTGATCCAGTTACCGGTGGAGAAATGACCCAGCTTGAATATTATAGTTTCCTTAAGCCAGAGGAAACATTCTA 1217 0.4864 MAHGTQTLTVTDSESQDSNSASESPPPPAGPLSSPTQNPSSPNLTTGSDATRIPSLLHLSFNQDSGCFAAGTDHGFRIYNCDPFREIFRREFGPGGGIGLVQMLFRCNILAFVGGGSDPRYPVNKVMIWDDHQSRCIGELSFRSEVKGVRLRRDRIVVVLAHKIFVYNFTDLKVLHQIETIANPKGLCEVSHVSGTMVLVCPGLQKGQVRVEHYASKRTKFIMAHDSRIACFALTQDGRLLATASSKGTLVRIFNTLDGSLLQEVRRGADRAEIYSLAFSATAQWLAVSSDKGTVHVFGLKVDSGLLGHDRSCNATESNATNPSTVSSLSFIKGVLPKYFSSEWSVAQFRLHEGAQYVVAFGHQKNTIVILGMDGSFYRCQFDPVTGGEMTQLEYYSFLKPEETF 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g03303 405 PANTHER WD-REPEAT PROTEIN INTERACTING WITH PHOSPHOINOSIDES WIPI -RELATED 33 405 - -
Bva13g03303 405 Gene3D - 51 388 IPR015943 GO:0005515
Bva13g03303 405 PANTHER AUTOPHAGY-RELATED PROTEIN 18A-LIKE ISOFORM X1 33 405 - -
Bva13g03303 405 MobiDBLite consensus disorder prediction 1 49 - -
Bva13g03303 405 SMART WD40_4 215 255 IPR001680 GO:0005515
Bva13g03303 405 SMART WD40_4 258 299 IPR001680 GO:0005515
Bva13g03303 405 SMART WD40_4 46 80 IPR001680 GO:0005515
Bva13g03303 405 SMART WD40_4 342 381 IPR001680 GO:0005515
Bva13g03303 405 MobiDBLite consensus disorder prediction 1 23 - -
Bva13g03303 405 SUPERFAMILY WD40 repeat-like 55 301 IPR036322 GO:0005515
Bva13g03303 405 Pfam WD domain, G-beta repeat 268 298 IPR001680 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g03303 Bva-Chr13 22817405 22820836 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g03303 K22991 - gmx:100787427 643.269
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g02906 04 24689012 24692502 Bva13g03303 13 22817405 22820836 BWGD
Bva13g03303 13 22817405 22820836 Bva04g03293 04 26522562 26525763 ECH
Bva13g03303 13 22817405 22820836 Bva13g03303 13 22817405 22820836 ECH