Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g02906 ATGATGCCAGTTGCACCAGTTGAGAGTATAGCCTCATTAAGTAGTGATCTCTTCTATGACATATTGCGACGTCTTGATGGTCCGACTCTGGCGAGTGTGGCATGTACTTGTGCAGCATTTTGTTCAATCTCAAAAGAAGAGAGTTTATGGGAGAATGTATGTTCATCTATGTGGCCTTCAACCAATAGGGAAgatgtcaaaaatttaatatcctCTATTGGTGGGTTCAGAAAATTCTATGCAGATTGTTTTCCTCTTATTGTAAGCAAGGAGTTTACTGAGTATCAATGGAACAACTATCTTGAGTACCCAGAAGATTGGACTGAGGCTGAATATTATGGGGACATGAATGAATCCGAGAGCATCTCTCCATcagattttgtttctattgtAGATATCAGGTATAAAGAGAAACCAATCTGCTCCAAAGTTCTATGGGGAATTCCAAATGCAAATGGCTTCAACGGTTGGTTCTACAACTGCCCTTTCCGAATTGATCTTCTTACTTATGCAGATAGAGATGATAACAATGATGGAGTGGTTACCCTTTCAGTATCCGATGGTCTGCCACCAATTACATCCatggaaagagaaaggaaagacgGTAAGCTGTGGCGGGAGCTTCGTGATGGGCTTCAGCTTAGTTGGATTGTtgtgaatagaaaaataaagcaagCTGCTAATCTTGCTAGCTGGAGCCCTCTTGGTGGTCAAAGACATTGGCCAACAGACAAAGATTTTGTCATACGCTTTGGTTCTGTTCTTCCTGCGAAGGACATTCTTCCTTGTCAGGTAGTGGAATGCATCCTTCTCATGAAGTTCAGAGTAATTCACACTGAAGAAGAAGGAGTTCAGACAACTCTTAAATTGACAGAGCTGAGCATGCAGCTGGAAGACATGGAAGGTGCTCATGTTAATGGAAGAAACAGTTTGCTTATTCTTAAAGAAGCACTCAGCTGCAGAAGGAGCAAAAACTACAGCGAAGTTCTCGAGTCTTGTCATATGTATTCAAAGGTGCAGAATGAGTTGAAAGAGGAGAAGATGAGAAACGAAAATAGGTTGGACAGACTTTGTATTTTAAGTGGCATTGCTGCTTTTATGACGTTCTGGTACTGCGTTTTGTG 1124 0.3897 MMPVAPVESIASLSSDLFYDILRRLDGPTLASVACTCAAFCSISKEESLWENVCSSMWPSTNREDVKNLISSIGGFRKFYADCFPLIVSKEFTEYQWNNYLEYPEDWTEAEYYGDMNESESISPSDFVSIVDIRYKEKPICSKVLWGIPNANGFNGWFYNCPFRIDLLTYADRDDNNDGVVTLSVSDGLPPITSMERERKDGKLWRELRDGLQLSWIVVNRKIKQAANLASWSPLGGQRHWPTDKDFVIRFGSVLPAKDILPCQVVECILLMKFRVIHTEEEGVQTTLKLTELSMQLEDMEGAHVNGRNSLLILKEALSCRRSKNYSEVLESCHMYSKVQNELKEEKMRNENRLDRLCILSGIAAFMTFWYCVL 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g02906 374 ProSiteProfiles F-box domain profile. 7 53 IPR001810 GO:0005515
Bva04g02906 374 PANTHER F-BOX DOMAIN-CONTAINING PROTEIN-RELATED 2 368 - -
Bva04g02906 374 Gene3D - 2 108 - -
Bva04g02906 374 PANTHER F-BOX PROTEIN-RELATED 2 368 IPR045283 -
Bva04g02906 374 SUPERFAMILY F-box domain 5 80 IPR036047 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g02906 Bva-Chr4 24689012 24692502 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g02906 - - gmx:100500689 706.442
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g02906 04 24689012 24692502 Bva13g03303 13 22817405 22820836 BWGD