Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g02383 ATGACTGATTCTGGCATCCTATGTTGCTACTCTCTGCTGCTGCTGGAAGATGGGACAAAGAATCCAATCCAAAGCAATGAAGATGCTGAAGGACCAGGACCAAGCAATAAAGAAGGAAACTGGTTTCAGCTGGGAAATAATAGATTTCGTgtcaaaacaatagaaatttATAACAAGTTGGGGAAAGAATTGGAGAAACTTGGTTATGTTGCTGACGTATCTTTTGCGTTAATTACAAGAAGTTATGGTGAAGAGAAGTATCAGACAATTAGATATCACGGAGAAAGAGCAGCTATAAAATCAGACAATTGGAGGAGAAGTTTGCCTCTCCATGCAGCTACAGATCAACCCGTTTCTATTTCTAATGTTGCATGCATCAGCAATGCTCTAAGGAAAGATGAACTAGGCATGGAAATAATGCAGATAACAATTCCTACCACTCTAGCTTTGGCAGCAGATCCTATTGCTTCTCTAATTGATACTGCATACATTGGCCGCTTAGGTCCTATAGAGCTTGCTGCTGTAGGAGTTTCTATTGCTATCTACAATCAAGTGTCCAAAATAGCAATAATTCCACTTGTCAGTGTAACAACCTCTTTAGTTGCCGAGGAAGATGCTGCTGAAAAATTGAGTACTCAACTGGTAGAAATGGAAACGCTGATCGGGATTTCTACTGACAATTTGGGAACGGATAAATTGAATGTAGAAAAACAGAATGAGCAAGCTGATTGCAGTTCATCTTCGATACAAATTGACAAAGTGACTAAACATGAGCATCAGAGATGTCACATTCCATCAGCTTCATCAGCATTAGTCGTTGGTGGAGTACTTGGACTTCTACAAGcgttatttctcatttttgcgGCTAACCCACTCTTCAATTACATGGGCATAGAATCTAATTCTCCTATGTTAAAGCCAGCAGGACAGTACTTGATGTTGAGGTCATTGGGTGCACCAGCTGTTATTCTTTCAATGTCCATGCAAGGGGTCTTTAGGGGAATCAAAGATACAAAAACCCCTTTATATGCTACAATTATAGGAGATGCAGCGAATATCATTTTAGACCCAATATTCATGTTCACACTGAAGTTAGGAATCAAAGGTGCAGCAATGGCACATGTTATCTCGCAGTACTTGATGTCCGTGATGCTATTGTGGAGTTTAATGAAACAAGTTGATCTACTCCCTCCAAGCACCAAGGACCTTAAGTTTGGGAAGATTCTTAAAAATGGATTTCTATTATTGGTGAGAGTTGTGGCTGTGACATTCTGTGTGACCCTGGCTGCATCCTTTGCAGCAAGGCAAGGCTCAACAACAATGGCAGCATTCCAAATCTGTTTACAGGTTTGGATGGCCACGTCTTTGATTGCTGATGGACTGGCTGTTGCTGGACAAACAATTCTGGCAAGTGCTTTTGCAAGCAAGAATTACGACAAGGTCATTGCTTCTGCTTCACGAGTATTGCAGCTTGGTTTGATTCTAGGGCTAGTACTCTGCCTCCTCCTTTTCAGTCTTCTACCAATTGCCTCTGGATTATTTACAAATGACATCAATGTCCTGCAACTTTTAAGTGTTGGCATTCCGTATGTTGCAGCAACTCAACCCATTAATGCTCTGGCATTTGTCTTTGATGGTGTGAACTATGGAGCATCAGATTTCATGTACTCTGCTTATTCAATGtTAATGGTGGCTATAGTGAGCATATTTTGCTTATATGTGTTATCCTCAACTTATGGTTTTGCTGGTATCTGGATTGCTTTGTCTATTTACATGAGCTTACGGGCATTTGCTGGCTTTTGGAGGATAGGGACTCGAACTGGACCTTGGAGTTTCATTTA 1841 0.402 MTDSGILCCYSLLLLEDGTKNPIQSNEDAEGPGPSNKEGNWFQLGNNRFRVKTIEIYNKLGKELEKLGYVADVSFALITRSYGEEKYQTIRYHGERAAIKSDNWRRSLPLHAATDQPVSISNVACISNALRKDELGMEIMQITIPTTLALAADPIASLIDTAYIGRLGPIELAAVGVSIAIYNQVSKIAIIPLVSVTTSLVAEEDAAEKLSTQLVEMETLIGISTDNLGTDKLNVEKQNEQADCSSSSIQIDKVTKHEHQRCHIPSASSALVVGGVLGLLQALFLIFAANPLFNYMGIESNSPMLKPAGQYLMLRSLGAPAVILSMSMQGVFRGIKDTKTPLYATIIGDAANIILDPIFMFTLKLGIKGAAMAHVISQYLMSVMLLWSLMKQVDLLPPSTKDLKFGKILKNGFLLLVRVVAVTFCVTLAASFAARQGSTTMAAFQICLQVWMATSLIADGLAVAGQTILASAFASKNYDKVIASASRVLQLGLILGLVLCLLLFSLLPIASGLFTNDINVLQLLSVGIPYVAATQPINALAFVFDGVNYGASDFMYSAYSMLMVAIVSIFCLYVLSSTYGFAGIWIALSIYMSLRAFAGFWRIGTRTGPWSFI 613
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g02383 613 Coils Coil 200 220 - -
Bva13g02383 613 MobiDBLite consensus disorder prediction 21 40 - -
Bva13g02383 613 CDD MATE_DinF_like 138 605 IPR044644 -
Bva13g02383 613 PANTHER PROTEIN DETOXIFICATION 126 613 - -
Bva13g02383 613 Pfam MatE 417 573 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Bva13g02383 613 Pfam MatE 267 358 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Bva13g02383 613 TIGRFAM matE: MATE efflux family protein 145 585 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Bva13g02383 613 PANTHER PROTEIN DETOXIFICATION 44, CHLOROPLASTIC-RELATED 126 613 IPR044644 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g02383 Bva-Chr13 18054702 18060369 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g02383 K03327 - gmx:100809975 640.573
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g02383 13 18054702 18060369 Bva13g02383 13 18054702 18060369 ECH
Bva13g02383 13 18054702 18060369 Bva09g00091 09 437756 441629 ECH
Bva13g02383 13 18054702 18060369 Bva07g02553 07 20281856 20288613 ECH