Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g00091 ATGGCTGAGAAAGATAGCCTATATTCATCAGGAGATGGGAGGAGGATACCAATTTGCTCTCTATTTAAGGATTCCAGGAGAATGGTTTTTAAGCGGGACAATCTTGGTCGGGAAATACTGTCAATTGCCTTGCCTGCAGCACTGGCTTTAACTGCCGACCCTATTGCTTCACTGGTTGATACAGCGTTTATTGGCCAAATAGGCCCAGTGGAGCTTGCAGCTGTAGGAGTTTCTATAGCTCTGTTTAATCAAGTGTCAAGGATCGCTATTTTCCCTCTTGTCAGTGTCACAACCTCTTTTGTGGCTGAGGAAGATACTATTAATACAGTGAAAGATACTATTAATATAGTGAGCCCTCAGGTAGACGAGGGTGAATACTTGGAGACAGGGTCAACTATGAATGGGGAAACCAAAGAGTTCATACCAATAAAGGGTGGAAGTAGAAACGTTGAGAGCTCAGATTCGGTTGGTGGCAGCCTCACTGTAGTGAAGCTTGAGCACAAGAGAAGACATATCCCTTCTGCTTCATCAGCTCTAGTCATTGGTGGCATCCTTGGTCTCATCCAGGCACTATTCCTCATAACTACAGCAAAGCCTTTATTGAACTTCATGGGAGTAACTCCCGACTCCCCCATGCTAAACCCCGCACAGCAGTACCTGACGCTGAGGTCACTTGGTGCTCCTGCAGTTCTTCTATCATTAGCCATGCAAGGAGTCTTCCGAGGATTCAAAGACACCAGAACTCCTTTATATGCCACGGTGGCAGGAGATGTAACAAACATAGCACTGGATCCCTTATTCATGTTTGTATTTCGTCTCGGCGTCAGTGGTGCAGCCATTGCTCATGTTATATCTCAGTACCTGATTTCAGTTATACTCCTTTGGAGGTTGATGGAACAAGTTGATCTTATACCTCCGAGCATCAAACATCTTCAATTTGACCGATTTCTGAAAAATGGTTTGTTATTATTAACGAGAGTCATTGCAGTAACGTTCTGTGTGACTCTTGCTGCCTCGTTAGCTGCACGTCAGGGATCGACATCCATGGCTGCATTTCAAGTCTGCCTCCAGGTTTGGTTGGCAACATCTCTTCTTGCCGATGGTCTTGCTGTTGCTGGACAGGCGATTCTTGCAGGAGCATTTGCAAACAAGGACTACGACAAGGCCGCGAGAACTGCTTCCCGAGTATTGCAGATGGGACTGGTTCTGGGATTGGCGCTTGCGCTCTTTCTCGGAGCAGGGATGTATTTTGGagcaaaattatttacaagagATGTCAATGTCCTCCGCCTAATTAGCATTGGAATTCCGTTTGTTGCAGCCACTCAACCCATCAATTCTTTGGCATTTGTATTTGATggcgtcaactttggagcatcTGACTTTGCTTATTCAGCCTTCTCCATGGTTATGGTGGCAATTGTCAGCATCATTTTTCTACTTATTCTCTCCGCTGTCGGTGGTTTCATCGGAATTTGGATTGCTTTGACCATATATATGAGTCTAAGAACATTTGCTGGCTTCTTAAGGATTGGAACAGGATCAGGACCTTGGGAGTTCCTGAGGAGCTA 1571 0.4437 MAEKDSLYSSGDGRRIPICSLFKDSRRMVFKRDNLGREILSIALPAALALTADPIASLVDTAFIGQIGPVELAAVGVSIALFNQVSRIAIFPLVSVTTSFVAEEDTINTVKDTINIVSPQVDEGEYLETGSTMNGETKEFIPIKGGSRNVESSDSVGGSLTVVKLEHKRRHIPSASSALVIGGILGLIQALFLITTAKPLLNFMGVTPDSPMLNPAQQYLTLRSLGAPAVLLSLAMQGVFRGFKDTRTPLYATVAGDVTNIALDPLFMFVFRLGVSGAAIAHVISQYLISVILLWRLMEQVDLIPPSIKHLQFDRFLKNGLLLLTRVIAVTFCVTLAASLAARQGSTSMAAFQVCLQVWLATSLLADGLAVAGQAILAGAFANKDYDKAARTASRVLQMGLVLGLALALFLGAGMYFGAKLFTRDVNVLRLISIGIPFVAATQPINSLAFVFDGVNFGASDFAYSAFSMVMVAIVSIIFLLILSAVGGFIGIWIALTIYMSLRTFAGFLRIGTGSGPWEFLRS 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g00091 523 TIGRFAM matE: MATE efflux family protein 45 493 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Bva09g00091 523 CDD MATE_DinF_like 35 513 IPR044644 -
Bva09g00091 523 PANTHER PROTEIN DETOXIFICATION 44, CHLOROPLASTIC-RELATED 12 522 IPR044644 -
Bva09g00091 523 Pfam MatE 175 266 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Bva09g00091 523 Pfam MatE 327 479 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Bva09g00091 523 PANTHER PROTEIN DETOXIFICATION 43 12 522 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g00091 Bva-Chr9 437756 441629 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g00091 K03327 - gmx:100780165 777.704
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva09g00091 09 437756 441629 Bva07g02553 07 20281856 20288613 BWGD
Bva09g00091 09 437756 441629 Bva09g00091 09 437756 441629 ECH
Bva09g00091 09 437756 441629 Bva07g02553 07 20281856 20288613 ECH
Bva13g02383 13 18054702 18060369 Bva09g00091 09 437756 441629 ECH