Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g02609 ATGGGCGAGCAAGAAGGGAAGCAACTTCCGTTGTTTGAGACGAAAGAAGCAAGATTTCGACTTGTTTACAAGGTGTTTGCATCAATAATATTTGCAGCCATTTGCTGGATATGGGTTTACAGATTAACCAACATTCCTGGAGCTGGAGAACAAGGGCGATGGGCTTGGATTGCCCTATCCATGTCTGAACTTGCGTTTGGACTCTATTGGATATTAAATCAGTCTGTTCGTTGGAGAATCGTCAATCACTATCCTTTCACAGAAAGACTTACACACAgATATGATGATGATAAGTTACCTGCTGTGGACATTTTTGTGTGCACAGCAGACCCTTTGTTGGAGCCTCCAAGTATGGTCATCAACACAGTGTTATCAGCAATGTCATACAATTATCCTCCAGAGAAGCttagtgtttatctttctGACGATGGAGGTTCTGAGATAACTTTCTATGCTCTCTTAAAGGCCACTGATTTTTCCAAGCATTGGTTACCCTTTTGCAGAAGATTCAAAATTGAACCGAGGTTGCCGGAAGCATGCTTTGCCGGCCACCATTCTGATGACAAAGAATGGCTTTCCATCAAGAAATTGTATGAAGAGATGAAAAGTCAGATTGAAACAGTTGAGAAAATGGGTAAGGTTTCTGAAGATCTGAGGAAACAACACAAAGGATTCTCTGAATGGAATTCCAAAACGACAAAGCAGGACCATCAATCCATTGTGGaaATCATAATTGATGGAAGAGACAGAAATGCCGTGGCCGATGATGGATTTCAACTGCCAACGCTTGTATACATGGCTCGGGAAAAGCACCCTAATCACCCTCACCACTTCAAAGCAGGAGCTATGAATGCACTAATAAGAGTTTCATCAGAGATAAGCAATGCACCTTTCATCCTCAACTTGGACTGTGATATGTATTCAAACAATGCAGATGCAATGAAAGAAGCTTTATGCTTCTTCATGGATGAAACAAAAGGCCACGAAATTTCTTATGTGCAGTTTCCACAGAAATATGACAATATCACCAAGAATGACATTTATGGAAGTTCATTCAACGTGTCCAATAAGATTGGGCTGGCTGGCATATGTGGATATGGAGCAGCTTTGTATTGTGGAACTGGCTGCTTTCATCGAAGAGAAAGCATTACTGGAATGCATTGGAAAGATTACAATGAAAAACCAAATAACTACTCTAAAAGAGAGGATAAGAGAAGCGTGCAAGAATTGATTGATGCCTCAAAGGTTCTTGTAGACTGTAACTATGAGCAAGGCACTCTATGGGGCAAGGAGATGGGATTAGTTTATGGGGTTTCTGTTGAGGACATTTGTACTGGCCTTGTTATATCTTGCAGAGGATGGAAATCAATTCACTATTATCCAGAGAGAAATGCTTTCTTAGGTGTGGCTCCAACAAAGTTAGATACAGTTCTTGTTCAACACAAGAGGTGGTCTGGAGGCATGTTTCAGATTTTCTTCTCAAAGTATTGCCCTTTCATTTATGGGTTTAGGAAGATAAAACTGGGTATGCAAATGGGATATAGTATCTACCTTTTGTGGGCTCCATTGTCCTTGCCCACTATCTGTTATATCATTGTTCCCCCTATTTGCTTATTAAGTGGCATTCCCTTATTCCCTCAGCTGACGAGCCTATGGTCCATTCCCTTTGCATATGCATTTCTTGCCAACACTGCTTATAGCTTATTCGAGAGTCTAACTTGTGGCGATACATTCAAGGGTTGGTGGAACTTTCAAAAAATCACACTCATCCGAAGGACCACTGCACacttttttggtttcattGATGTTATGAGAAAGCAATTAGGACTATCTGAGACAAAATTTGACATCACAGACAAGACAGTGTCAGAGGATACTCTCAAGAGATACGAGGAAGAGGTCTTTGattttggaagctcttcaacTATGTTTACAATGATAGCCACATTTGCTTTGCTGAACCTTTTTGGATTCATTGGGGGATTGAAGAGAGTGATCATGGATTTGGACTTCAAAAGTTCAAGCCAATTGATTCTGCAGATTGTTGTTTGTGCAGTGATTGTAATGGTCAATAAACCAGTTTATGAGGCACTCTTCTTCCGGAATGATAATGGCCGGTTTCCATCTTCCGTCGTGCTCAAGTCCATACTTGTGGCTTCTTTGGCTTGCTGCTTTGCAACTCTTTTCTA 2189 0.4011 MGEQEGKQLPLFETKEARFRLVYKVFASIIFAAICWIWVYRLTNIPGAGEQGRWAWIALSMSELAFGLYWILNQSVRWRIVNHYPFTERLTHRYDDDKLPAVDIFVCTADPLLEPPSMVINTVLSAMSYNYPPEKLSVYLSDDGGSEITFYALLKATDFSKHWLPFCRRFKIEPRLPEACFAGHHSDDKEWLSIKKLYEEMKSQIETVEKMGKVSEDLRKQHKGFSEWNSKTTKQDHQSIVEIIIDGRDRNAVADDGFQLPTLVYMAREKHPNHPHHFKAGAMNALIRVSSEISNAPFILNLDCDMYSNNADAMKEALCFFMDETKGHEISYVQFPQKYDNITKNDIYGSSFNVSNKIGLAGICGYGAALYCGTGCFHRRESITGMHWKDYNEKPNNYSKREDKRSVQELIDASKVLVDCNYEQGTLWGKEMGLVYGVSVEDICTGLVISCRGWKSIHYYPERNAFLGVAPTKLDTVLVQHKRWSGGMFQIFFSKYCPFIYGFRKIKLGMQMGYSIYLLWAPLSLPTICYIIVPPICLLSGIPLFPQLTSLWSIPFAYAFLANTAYSLFESLTCGDTFKGWWNFQKITLIRRTTAHFFGFIDVMRKQLGLSETKFDITDKTVSEDTLKRYEEEVFDFGSSSTMFTMIATFALLNLFGFIGGLKRVIMDLDFKSSSQLILQIVVCAVIVMVNKPVYEALFFRNDNGRFPSSVVLKSILVASLACCFATLF 729
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g02609 729 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 6 724 - -
Bva12g02609 729 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 229 393 IPR029044 -
Bva12g02609 729 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 90 178 IPR029044 -
Bva12g02609 729 PANTHER CELLULOSE SYNTHASE-LIKE PROTEIN CSLE 6 724 - -
Bva12g02609 729 Pfam Cellulose synthase 102 395 IPR005150 GO:0016020|GO:0016760|GO:0030244
Bva12g02609 729 Pfam Cellulose synthase 408 721 IPR005150 GO:0016020|GO:0016760|GO:0030244
Bva12g02609 729 SUPERFAMILY Nucleotide-diphospho-sugar transferases 116 517 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g02609 Bva-Chr12 19305618 19309725 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g02609 4 728 Glycosyltransferase AT1G55850 47.613 0.0 695
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g02609 - - gmx:100816849 1032.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva12g01145 12 11054436 11062002 Bva12g02609 12 19305618 19309725 BWGD
Bva12g02609 12 19305618 19309725 Bva12g01144 12 11045982 11052102 BWGD
Bva12g02609 12 19305618 19309725 Bva12g02609 12 19305618 19309725 ECH