Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g01145 atggGAGAAGGGAAGCAACTTCCATTGTTTGAGTCAAAAGAAGCAAGTTTTCGACTCGTTTACAAGCTGTTTGCATCTACAATATTTGCAGCCATTTGCTGGATATGGGTTTATAGATTCACAAACTTTCCGAGAGCAGGAGAACAAGGGCGATGGCCATGGATCGCCATATCCATGTCTGAACTTGGTTTTGGACTCTACTGGATAATCACTCAGTCTGTTCGTTGGAAAATCATCTATCAATCTCCTTTCAAACAAAGGCTCTCAAACAGATACGGAGAAGACAAATTACCTTCTGTGGACATTTTTGTGTGCACAGCAGACCCTTTGATGGAGCCTCCAAGTTTGGTCATTAACACAGTGCTATCAGCGATGTCTTACAATTATCCTCCAGAGAAACTCAGTGTTTACCTTTCCGATGATGGAGGTTCTGAGCTAACTTTCTATGCTCTCTTAAGGGCCTCTGATTTCTCCAAGCATTGGTTGCCCTTTTGCAGAAGATTCAACATTGAACCCAGGTCGCCGGAGGCATACTTCTCGGGCCACCATTCCGATGACAAAGAATGGCTCTCCATCAAGAAATTATATGAAGGGATGAAAAGCAAGATTGAATCAGTTCAGAAAATGGGTAAGATATCTGAAGATATGAGGAAACAACATAGAGGATTCTCAGAATGGAATCCCAAAATGACAAAGCAGGACCATCAATCCATTGTGCAgATCATAATTGATGGAAGAGACAGAAGTGCTGTGGATGATGATGGATTTCAATTGCCAACGCTTGTATACATGGCTCGGGAAAAGAGACCTAATCACCCTCACCACTTCAAAGCAGGAGCAATGAATGCACTAATAAGAGTTTCATCAGTGATAAGCAATGCTCCTTTCATTCTCAACTTGGACTGTGACATGTATCCAAATAATGTAGATGCAGTGAAAGAAGCTCTATGTTTCTTCCTGGATGAAGAAAAAGGCCACGCAATTTCTCATGTGCAATTTCCACAGAACTTTCACAACATTACCAAGAATGACCTTTATGGAAATTCACTTCCTGTAATCAACAAGTTTGAGATGCCTGGCTTATGTGGATATGGAGCAGCTGTGTACTCTGGAACTGGGTGTTTCCATCGAAGAGAAAGCATTACAGGAATGCACTTCAAAGATTATAAATCAAAACACGACAGCTACTccaaaagagaagacaagagAACCGTGGATGAATTGATCGATGCCTCAAAAGTTCTTGCAGATTGTACCTACGAGCAAGGCACTCTATGGGGCAAGGAGATGGGATTGGTATATGGTATTTCTGTTGAAGACGTTTCCACTGGCCTCGTTATCTCTTGCAGAGGATGGAAATCGATTTATTACAATCCAGAGAGACCAGCTTTCTTGGGTATGGCTCCAGCAACCATGGATGTTGTTCTTGTTCAACAAACGAGGTGGTCTGAAGGCATGTTCCAGATTTTCTTCTCAAAGTACTGTCCTTTCATTTATGGGTATAGGAAGATAAAACTGGGTGTTCAAATGGGATACTGTGTCTATCTCTTGTGGGCTCCACTGTCCCTACCCTTTCTTTGTTATGTAATTGTTCCTCCAATCTGCCTACTCAAAGGCATTCCCTTATTCCCTCAgCTTACAAGCCCGTGGTTCCTTCCCTTTGCATATGCATTTCTTGCCAATGCTGCGTATAGCTTATGTGAGGGTCAGAGTTGTGGCCAAACCTTCAAGGGTTGGTGGAACTTGCAGAGAATGAGGCTCATTCGAAGAACCACTGCATATTTTATTGGTTTCGTCGATGTTATAAGAAAGCAATTAGGCCTATCTCAGACCAAATTCGTTCTCACAGATAAGGAAGCATCAGAAGATGCCCTAAGGAGATATGAGCAAGAGGTGTTTGattttggaagctcttcagTTATGTTCACCATGATTGCAACATTAGCATTGCTAAACCTCTTCGGATTCATTGGGGGAATGAAGAGTGTGATAATGGATTTGAACTTGAACGGTTCAAGCCAATTGATTCTGCAAACTATGCTTACTGCACTGATTACAATGGTGAATAAACCAGTTTATGAGGCTCTCTTCATACGCAATGATAAAGGCCGGTTTCCATCTTCAGTCATTGTCAAGTCCATGTTTTTGGCTTCACTGGCTTGCTGCCTTGCATCAGTTTTCTA 2183 0.4127 MGEGKQLPLFESKEASFRLVYKLFASTIFAAICWIWVYRFTNFPRAGEQGRWPWIAISMSELGFGLYWIITQSVRWKIIYQSPFKQRLSNRYGEDKLPSVDIFVCTADPLMEPPSLVINTVLSAMSYNYPPEKLSVYLSDDGGSELTFYALLRASDFSKHWLPFCRRFNIEPRSPEAYFSGHHSDDKEWLSIKKLYEGMKSKIESVQKMGKISEDMRKQHRGFSEWNPKMTKQDHQSIVQIIIDGRDRSAVDDDGFQLPTLVYMAREKRPNHPHHFKAGAMNALIRVSSVISNAPFILNLDCDMYPNNVDAVKEALCFFLDEEKGHAISHVQFPQNFHNITKNDLYGNSLPVINKFEMPGLCGYGAAVYSGTGCFHRRESITGMHFKDYKSKHDSYSKREDKRTVDELIDASKVLADCTYEQGTLWGKEMGLVYGISVEDVSTGLVISCRGWKSIYYNPERPAFLGMAPATMDVVLVQQTRWSEGMFQIFFSKYCPFIYGYRKIKLGVQMGYCVYLLWAPLSLPFLCYVIVPPICLLKGIPLFPQLTSPWFLPFAYAFLANAAYSLCEGQSCGQTFKGWWNLQRMRLIRRTTAYFIGFVDVIRKQLGLSQTKFVLTDKEASEDALRRYEQEVFDFGSSSVMFTMIATLALLNLFGFIGGMKSVIMDLNLNGSSQLILQTMLTALITMVNKPVYEALFIRNDKGRFPSSVIVKSMFLASLACCLASVF 727
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g01145 727 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 5 723 - -
Bva12g01145 727 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 228 392 IPR029044 -
Bva12g01145 727 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 89 184 IPR029044 -
Bva12g01145 727 PANTHER CELLULOSE SYNTHASE-LIKE PROTEIN CSLE 5 723 - -
Bva12g01145 727 SUPERFAMILY Nucleotide-diphospho-sugar transferases 114 494 IPR029044 -
Bva12g01145 727 Pfam Cellulose synthase 409 721 IPR005150 GO:0016020|GO:0016760|GO:0030244
Bva12g01145 727 Pfam Cellulose synthase 100 393 IPR005150 GO:0016020|GO:0016760|GO:0030244
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g01145 Bva-Chr12 11054436 11062002 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g01145 3 724 Glycosyltransferase AT1G55850 49.796 0.0 712
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g01145 - - gmx:100779861 1055.82
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva12g01145 12 11054436 11062002 Bva12g02609 12 19305618 19309725 BWGD