Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g01144 ATGGCTAGCGGAGAGTATTCTCCattgtttgagaccaagagaGACAAAGCAAGAGTGATTCGTAGGTTGTCTGCAATCTCTCTGTTTGTGAGCCACTGCCTCATCTGGGTTTACAGATTGAACCACATATCAGAAAATGGTGGCAGATGGGTCTGGTTTGGTTTGCTTGCTTCCGAGCTATGGTTCGGTCTTTACTGCGTCATCACCCAAGCTCTTCGCTGGAACATTGTCTTCAGGCAACCCTTCCCAGACAGGCTCTCCCAAAgATACGAGGGTAGATTGCCAAAAGTGGATATTTTTGTGTGTACGGCAGATCCAGAGATTGAGCCACCGACGATGGTCATTAACACAGTGTTATCAATGATGGCTTATGACTATCCAACAGAGAATCTCAGTGTGTACCTCTCAGACGATGCTGCCTCTGAGGTTACCTTCTATGCAATGTTAGAGGCTTCTGACTTTGCCAAACACTGGTTGCCATTCTGCAAGAGGTTCAAAGTGGAGCCAAGGTCACCTGCTGCTTATTTTAGACAAGATTACTCATTGGCTGGTGATGCTAATCTGCTTATGCAATTGGCCCACGTCAAGaaattatatgaaaatatggaaaaaagaattgaaaatgtaGCCAAATTGGGTCGAGTAACTGAAGAAATACGCTCAAATCACAAGGGATTTTCTCAATGGAAATCATATTCTTCTCGCCAAGACCATGACGCAATTATTCAAATTTTACTTGATAAAAAGGACCCAAAGTCAAAAGATGTAGATGGGTCTGTTTTGCCAACTCTTATATATTTGGCTCGTGAGAAGAGACCCCAGTATCACCATAACTTCAAAGCTGGGGCTATGAATTCACTGATAAGGGTATCATCAAAGATTAGCAATGGCGACATTATCCTTAATGTAGATTGTGACATGTACTCAAACAATTCACAATCTCTAAGAGGTGCACTGTGCTTTTTCATGGATGAGGAGAAAGGGCATGAGATTGCTTATGTGCAGTGTCCACAGGACTTTGAGAATGTCACCAAGAATGATTTGTATGGTAGTGCTCTGTCAGTGATTTTCCTAGTGGAACTCCCTAGTGCTGATGGTTATGGTGGCCCTTTGTATTGTGGATCTGGCTGCTTTCACAGGAGAGAAAGTCTCAGCGTGAGGAAGTTCAGTGATCAATACAAAAAGAATTGGAAGACTGAGAATGGCCAAGTGATAGAAACAAGCTTGGATGAactagaagaaaaatcaaaggcCCTTGCAAGCTGTGTCTATGAGGAAAACACACTGTGGGGGAAAGGGATGGGACTAGAATATGGGTGTGCTGTGGAGGATGTGATTACAGGGTTATCTATACAGTGCCAAGGATGGAAATCAGTGTGCTATAACCCTCCAAGGAAAGCATTCTTAGGTGTAGCTCCAAGCACCTTGCCTCAAACACTTGTTCAATTCAAGAGATGGTCAGAAGGAGATTGTCAAATTTTGCTTTCCAAATATAGCCCTGCATGGTGTGCTCGTGGTAGGATCAGTATTGGCCTACGAATGGCATATTTGACGTATTGCCTATGGCCTCCTTGTAGCTTGCCAACACTATACTACTCTATCATCCCTTCTTTGTATCTCCTCAAAGGCATTTCCTTATTTCCACAGATGTCAAGTCCATGGTTCATACCTTTCGCATATGTTACACTTGGAGAAAGTATTTACAGCTTGTATGAGTTTTTGTGGATTGGAGGCACAATCAAGGGCTGGTGGAATGATCAAAGGATATGGCTTTACAAGAAATCAAGTTCCTTTCTCTTTGCTCTTATTGACATCATGCTGAAGCAAATTGGGTTATcagatttatcatttaaaatcaCACCTAAAGTGGTAGAAGAAGAGGTTTCCCAACGGTTCGAGAAAGAAGTTATGGAGTTCGGAGACTCCTCCCCAATGTTCACTCTTCTGGCAACATTGGCAATGctcaatttgttttgttttctggtAGTGTTAAAGGATGCAATCCTAAGTGGGCTTGGAGTTATTCAGACAATGATTTTTCAAGTGCTTCTATGTGGGTGTTATGTTCTCATCAATTGGCCTCTCTATGAAGGCCTTTTCTTAAGGAAAGACAAGGGAAGATTGCCAAGCTCTGTTGCAGTTAAGTCAATAGCACTGGCTCTAAGTGTATGCGTCCTCTTCATTGCCTTGCACTA 2195 0.4096 MASGEYSPLFETKRDKARVIRRLSAISLFVSHCLIWVYRLNHISENGGRWVWFGLLASELWFGLYCVITQALRWNIVFRQPFPDRLSQRYEGRLPKVDIFVCTADPEIEPPTMVINTVLSMMAYDYPTENLSVYLSDDAASEVTFYAMLEASDFAKHWLPFCKRFKVEPRSPAAYFRQDYSLAGDANLLMQLAHVKKLYENMEKRIENVAKLGRVTEEIRSNHKGFSQWKSYSSRQDHDAIIQILLDKKDPKSKDVDGSVLPTLIYLAREKRPQYHHNFKAGAMNSLIRVSSKISNGDIILNVDCDMYSNNSQSLRGALCFFMDEEKGHEIAYVQCPQDFENVTKNDLYGSALSVIFLVELPSADGYGGPLYCGSGCFHRRESLSVRKFSDQYKKNWKTENGQVIETSLDELEEKSKALASCVYEENTLWGKGMGLEYGCAVEDVITGLSIQCQGWKSVCYNPPRKAFLGVAPSTLPQTLVQFKRWSEGDCQILLSKYSPAWCARGRISIGLRMAYLTYCLWPPCSLPTLYYSIIPSLYLLKGISLFPQMSSPWFIPFAYVTLGESIYSLYEFLWIGGTIKGWWNDQRIWLYKKSSSFLFALIDIMLKQIGLSDLSFKITPKVVEEEVSQRFEKEVMEFGDSSPMFTLLATLAMLNLFCFLVVLKDAILSGLGVIQTMIFQVLLCGCYVLINWPLYEGLFLRKDKGRLPSSVAVKSIALALSVCVLFIALH 731
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g01144 731 SUPERFAMILY Nucleotide-diphospho-sugar transferases 98 584 IPR029044 -
Bva12g01144 731 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 232 394 IPR029044 -
Bva12g01144 731 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 87 194 IPR029044 -
Bva12g01144 731 Coils Coil 192 212 - -
Bva12g01144 731 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 6 726 - -
Bva12g01144 731 PANTHER CELLULOSE SYNTHASE-LIKE PROTEIN E1 6 726 - -
Bva12g01144 731 Pfam Cellulose synthase 399 730 IPR005150 GO:0016020|GO:0016760|GO:0030244
Bva12g01144 731 Pfam Cellulose synthase 97 386 IPR005150 GO:0016020|GO:0016760|GO:0030244
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g01144 Bva-Chr12 11045982 11052102 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g01144 2 725 Glycosyltransferase AT1G55850 56.027 0.0 810
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g01144 - - gmx:100815825 1047.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva12g02609 12 19305618 19309725 Bva12g01144 12 11045982 11052102 BWGD