Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g01742 ATgccttcttcttcccttcaaCTCCACCGTTTCGACCCCACCACTGATGCCGCCACCGCATCCGCCGCCCTAGCAAACGGACTAAACTGCCCCAAACAGGCTCACACCTCGCCCGCACGCCGTCTCGTCATGCCCCTATCTTGCAACGTTCCCGCTCTACCAGACTCCGCAGCCCGTCACCACGCGCACGTGGTGGGGCCCGACCAGTGCTGCTCCTTCGTGATCCAGTCCGTCGACGCCCCCGTCTCCACCGTTTGGTCCGTCGTTCGTCGTTTCGATAACCCCCAGGCTTACAAGCATTTCGTCAAGAGCTGCCAAGTCATTGACGGCGACGGCATTAACGTCGGCACGCTCCGCGAGGTCCGCGTCGTCTCTGGCCTCCCCGCCGTGTCCAGCACCGAGCGCTTAGAGATCCTCGACGACGAAAGCCACGTCATCAGCTTCAGCGTGGTCGGGGGAGACCATCGCCTGAGGAACTACCGGTCCGTCACGACCCTCCACTCCAATGGGAGCGGGACTGTTGTCATCGAGTCGTACGTTGTTGATGTACCGGTCGGTAACACGACGGAAGAAACCTGCGTGTTCGTCGACACAATCGTACGGTGCAATTTGCAGTCGTTGGCTCAGATCGCCGAAAGCATGGCCACAAGAGACCAGGAATTGCAACAATCTACGTG 677 0.5879 MPSSSLQLHRFDPTTDAATASAALANGLNCPKQAHTSPARRLVMPLSCNVPALPDSAARHHAHVVGPDQCCSFVIQSVDAPVSTVWSVVRRFDNPQAYKHFVKSCQVIDGDGINVGTLREVRVVSGLPAVSSTERLEILDDESHVISFSVVGGDHRLRNYRSVTTLHSNGSGTVVIESYVVDVPVGNTTEETCVFVDTIVRCNLQSLAQIAESMATRDQELQQST 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g01742 225 CDD PYR_PYL_RCAR_like 70 212 - -
Bva12g01742 225 SUPERFAMILY Bet v1-like 75 210 - -
Bva12g01742 225 Pfam Polyketide cyclase / dehydrase and lipid transport 77 212 IPR019587 -
Bva12g01742 225 Gene3D - 32 225 IPR023393 -
Bva12g01742 225 PANTHER - 42 217 - -
Bva12g01742 225 PANTHER ABSCISIC ACID RECEPTOR PYL4 42 217 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g01742 Bva-Chr12 14507877 14509083 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g01742 K14496 - gmx:100804400 301.212
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva12g01742 12 14507877 14509083 Bva12g01393 12 12271225 12272437 ECH
Bva02g00414 02 5791478 5792433 Bva12g01742 12 14507877 14509083 ECH
Bva01g00109 01 855227 856065 Bva12g01742 12 14507877 14509083 ECH
Bva12g01742 12 14507877 14509083 Bva12g01742 12 14507877 14509083 ECH