Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Bva01g00109 | ATGCCTCCAAATCCTCCCAAGTCCTCCGTTCTCCTCCACCGCATCAACCACTCCCCCGCCGCCGCCAACGTCGCTCACTGCCACCATGATTCACTCTTGAAGACATCACCCCCCGCCGCTGTCCCCGACACCGTGGCGCGTTACCACACCTACTCCGTTGGCCCCGACCAGTGTTTTTCCTTCGTCATCCAGGAGATCCATGCCCCCGTCTCCACTGTCTGGTCCGTCGTCCGCCGCTTTGACAAACCGCAAGCCTACAAGCACTTCCTCAAGAGCTGCCACGTCATCGTCGGGGACGGCGACGTCGGCACTCTCCGTGAGGTCCACGTTATCTCCGGTCTCCCCGCCGCCAACAGCACGGAGCGGCTCGAGATCCTCGACGACGAGCGGCACGTGCTCAGCTTCAGCGTTGTCGGTGGGGACCACAGGCTCGCTAACTATCGCTCCGTAACGACCCTCCACCCCACCGGTGACGGAGATGGGAATAACCGCACGGTGGTGGTGGAGTCGTATGCTGTGGATGTGCCGCCGGGGAATACCAAGGAGGAAACGTGTGTGTTTGTAGATACAATCGTTCGGTGCAACCTGCAGTCGCTGGCACAAATCGCCGAGAACTTGGCATG | 623 | 0.6116 | MPPNPPKSSVLLHRINHSPAAANVAHCHHDSLLKTSPPAAVPDTVARYHTYSVGPDQCFSFVIQEIHAPVSTVWSVVRRFDKPQAYKHFLKSCHVIVGDGDVGTLREVHVISGLPAANSTERLEILDDERHVLSFSVVGGDHRLANYRSVTTLHPTGDGDGNNRTVVVESYAVDVPPGNTKEETCVFVDTIVRCNLQSLAQIAENLA | 207 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Bva01g00109 | 207 | CDD | PYR_PYL_RCAR_like | 62 | 204 | - | - | |
| Bva01g00109 | 207 | PANTHER | ABSCISIC ACID RECEPTOR PYL4 | 30 | 207 | - | - | |
| Bva01g00109 | 207 | PANTHER | - | 30 | 207 | - | - | |
| Bva01g00109 | 207 | Pfam | Polyketide cyclase / dehydrase and lipid transport | 64 | 204 | IPR019587 | - | |
| Bva01g00109 | 207 | SUPERFAMILY | Bet v1-like | 62 | 202 | - | - | |
| Bva01g00109 | 207 | Gene3D | - | 17 | 207 | IPR023393 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Bva01g00109 | Bva-Chr1 | 855227 | 856065 | Dispersed/Wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Bva01g00109 | K14496 | - | tcc:18597464 | 308.531 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Bva01g00109 | 01 | 855227 | 856065 | Bva12g01742 | 12 | 14507877 | 14509083 | ECH | |
| Bva01g00109 | 01 | 855227 | 856065 | Bva12g01393 | 12 | 12271225 | 12272437 | ECH | |
| Bva01g00109 | 01 | 855227 | 856065 | Bva01g00109 | 01 | 855227 | 856065 | ECH |